Planktothrix agardhii: NIES204_02870
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Entry
NIES204_02870 CDS
T05658
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pagh03000
]
NIES204_02870
Transcription factors [BR:
pagh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NIES204_02870
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
PBP_like
Motif
Other DBs
NCBI-ProteinID:
BBD53024
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Position
353144..354169
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AA seq
341 aa
AA seq
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MIKIPKTIKYWVKGGYRILMQATLHQLKVFEAVARHRSFTKAAEEMMITQPTVSTQVKQL
TQTVGLPLFEQIGKQLYLTEAGESLLSTCQNIFEQLDNLEMQIAALKGTKQGRLRLGVVS
TAKYFVPRLLGCFCQQYPGIDIALQVTNHATLIQRMQDNQDDLYILSQPPEDIALSTQPF
LDNPLVVVARQDHPLVGEKNIPIKSLMGEPFIMREQGSGTRHAVQKLFERYKVGVKVRLE
LGSNEAIKQAIAGGLGLSVLSQHTLVAEQLMGELTILDVQHFPIHLRWYVTHLEGKQLSI
IAETFLKFLLENTSHIPTLGTLGLHKEHLNNNNQGNLVKMG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatcccgaaaaccatcaaatattgggtaaaaggaggatatagaattttgatg
caggcaacattacaccaattaaaggtatttgaggcggtggcccgtcatcgtagctttact
aaagccgccgaagaaatgatgattacccagccaacggtctccacccaagttaaacaactg
actcagaccgtgggtttaccgttatttgaacaaattggcaaacaactctatctgaccgaa
gccggggaatctttattatctacctgtcagaatatttttgaacagttggacaatttagaa
atgcagatagcagcattaaaaggaacaaaacaaggacggttacggttaggagtagtttca
acagctaaatattttgtccctcgattattaggttgtttttgtcaacaatatccggggatt
gatattgccttgcaagtcaccaatcatgccactttaattcaacgaatgcaagataatcag
gatgatttgtatattctgagtcaacctcctgaagatattgctttatctactcaacctttt
ttagataatcctttagtggtggtggctagacaggatcatcctttggttggagaaaaaaat
attccaattaaatctttaatgggagaaccttttattatgcgagaacagggttcaggaaca
cgccacgcagttcaaaaactatttgagcgctataaagttggggttaaagttcggttagaa
ttaggcagtaatgaagccattaaacaagcgatcgccggaggtttagggctttcagtatta
tctcaacatactttagtagcagaacagttaatgggagaattaaccattttagatgtccag
catttcccgattcatttgcggtggtatgtcactcatttagaaggaaaacaactgtctatt
attgcagaaacatttttaaaatttttattagaaaataccagtcatattcccactttagga
accctagggttacacaaggaacatttgaacaataataatcagggaaatttagttaaaatg
ggataa
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integrated database retrieval system
