Planktothrix agardhii: NIES204_03770
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Entry
NIES204_03770 CDS
T05658
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NIES204_03770 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pagh03019
]
NIES204_03770 (pnp)
03016 Transfer RNA biogenesis [BR:
pagh03016
]
NIES204_03770 (pnp)
Enzymes [BR:
pagh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NIES204_03770 (pnp)
Messenger RNA biogenesis [BR:
pagh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NIES204_03770 (pnp)
Transfer RNA biogenesis [BR:
pagh03016
]
Prokaryotic type
tRNA degradation factors
NIES204_03770 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KhpA-B_KH
KH_2
POU2AF2
aRib
Motif
Other DBs
NCBI-ProteinID:
BBD53114
UniProt:
A0A2Z6CAE2
LinkDB
All DBs
Position
complement(453325..455475)
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AA seq
716 aa
AA seq
DB search
MEEIIKSISFDGRDIRLKIGLLAPQAGGAVLIESGDTSVLVTATRAEGRPGLDFLPLLVD
YEERLYAGGRIPGGFLRREGRPPDRVTLTSRLIDRPLRPLIPHWLRDDIQVVATTLSMDE
QVPPDVLAVTGASVAVILARIPFFGPMAAVRVGLVGDDFIINPTYREVKNGDLDLVVAGS
PDGVVMVEAGANQLPEQDIIEAIDFGYEAVCDLIKAQEELMRDLGIEVKPGEPPEGNQGL
IQFVRDRVTLPVKQVLKQHDLDKTARDANLDKIKESEVIAPIETLPADDPLRVAVAEDSK
LVSQIFKDITKTLMRQQIVEDSVRVDGRSLDQVRPVSCKVSCLPKRVHGSGLFNRGLTQV
LSIATLGTPGDAQDLDDLHPQEEKRYMHHYNFPPYSVGETKPMRSPGRREIGHGALAERA
LVPVLPSKDQFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPISKPVSGAAMGLIK
EGEEVRILTDIQGIEDFLGDMDFKVAGTDTGVTALQMDMKITGLPMKTVADAIHQAKPAR
LHILEKMLEVIGKPRSDLSPYAPRLLTLKIDPDLIGLVIGPGGKTIKGITEETGVKIDID
DDGTVTIASTDSENAARAYQIIQGMTRKLNTGDVYVGRITRIIPIGAFVELLPGKEGMIH
ISQLADYRVPRVEDEVSVGDEVIVKVREIDSKGRINLTRLNIHPDEAAAARAAGAK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatcattaagtcgatatcctttgatggaagggatattcgactcaaaataggt
ttacttgcgccacaggcaggtggagccgtattaatcgagtctggagatacatcagttcta
gtgactgcgactcgcgccgaaggtagacccggattggactttctgcccttgttggtggac
tatgaggagcgactgtacgcggggggaagaattccagggggattcttacgcagggaaggt
cgtccacccgatcgcgttaccttaaccagtcgtttgattgaccgtcccttacgtcctctg
attccccattggttgcgggatgatattcaggttgtggccacaactctgtcgatggatgaa
caagtacccccggatgttttagcggtgacgggtgcttctgtagcggtgatcttggcaaga
attcccttttttggcccgatggctgcggtacgagttgggttagtcggagatgactttatt
atcaatccgacttaccgggaagtcaaaaatggggatttagatttagtcgtggcgggttcc
ccggatggcgtggtgatggtggaagcgggtgcgaaccaactaccggaacaggatattatc
gaagcgatcgactttggttatgaagcggtttgtgatttaatcaaggcccaagaggaatta
atgcgggacttaggaattgaggtcaaacccggagagccccccgaaggaaatcaggggtta
atccagtttgtccgcgatcgcgtcactctcccggttaaacaggttctcaaacaacatgat
ctggataaaaccgcccgggatgccaacctagataaaatcaaggaaagtgaggtgattgct
ccgattgaaactctacccgcagatgatccactccgggtggcggtggctgaggattctaag
ttggtgagtcagattttcaaggacatcaccaaaaccttgatgcgtcagcaaattgttgaa
gatagcgtgcgggtggatggtcgtagcttggatcaggtgcgtccggtatcttgtaaggtc
agttgtttaccgaaacgggtacatggtagcggtttgtttaatcgcggtttaactcaagtg
ttgtcaattgccactttagggacgcccggagatgctcaggatttggatgacttgcatccc
caggaagaaaaacgctatatgcaccactacaattttcccccttattcggttggggaaact
aaacccatgcgatcgcctggacgtagggaaattggtcatggagctttagcggaacgggcc
ttagttccggtattaccttctaaggatcagtttccctatgtgattcgggtggtttcagag
gtcttatcttctaacggttcaacttctatgggttcggtctgtggctcgactctggcgttg
atggatgccggggtgccgatttctaaacccgtgagtggggcggcgatgggattaattaaa
gaaggggaagaagttcggattctcactgatatccaaggaatcgaggactttttaggagat
atggatttcaaggtggcggggacagataccggagtcactgccctacaaatggatatgaaa
atcaccgggttgccgatgaagacggtggcggatgccattcatcaagctaaaccagcccga
ctgcatatcctagaaaaaatgttggaggtaattggcaaacctcgttcggatttgtctccc
tacgctcctcggttattaaccttaaaaatcgatcccgatttgattggtttggtgattggg
cctggagggaaaaccattaaggggattaccgaagaaaccggagtcaaaattgatattgat
gatgatggtacggtaacaattgcttccaccgatagcgaaaatgcggctcgcgcctatcaa
atcattcaaggcatgactcgcaaactgaataccggggatgtgtatgtgggccgaattact
cggattatcccgattggggcatttgtggaattacttcctggtaaggaagggatgattcat
atttcccagttagcagattatcgggttcctcgggtggaggatgaagtctccgtcggggat
gaagtgattgtcaaagttcgggaaattgacagtaaaggtcggattaatctgacccgtctg
aatattcaccccgatgaagctgcggctgcacgggcggcaggggcgaaatag
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