Planktothrix agardhii: NIES204_04850
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Entry
NIES204_04850 CDS
T05658
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00521
Streptomycin biosynthesis
pagh00523
Polyketide sugar unit biosynthesis
pagh00525
Acarbose and validamycin biosynthesis
pagh00541
Biosynthesis of various nucleotide sugars
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01250
Biosynthesis of nucleotide sugars
Module
pagh_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NIES204_04850 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NIES204_04850 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NIES204_04850 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NIES204_04850 (rfbB)
00525 Acarbose and validamycin biosynthesis
NIES204_04850 (rfbB)
Enzymes [BR:
pagh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NIES204_04850 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
Motif
Other DBs
NCBI-ProteinID:
BBD53222
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Position
579701..580804
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AA seq
367 aa
AA seq
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MAVQYSYDNTSNRSPHCILITGGAGFIGSNFVHHWFSAYPDDRIVVLDALTYAGNLQNIV
SLEHNPNFRFVQGDICDRPLIDSLLKEEQINTIAHFAAESHVDRSIIGPGAFVQTNVVGT
FTLLEAFRQYWIAQGQPEHYRFLHVSTDEVYGSLGPNDHAFTEQTPYTPNSPYSASKAGS
DHLARAYYHTYGMPTIITNCSNNYGPYHYPEKLIPLMCINALLGKPLPVYGDGENVRDWL
YVLDHCRALDAVIHNGRIGETYNIGGNNEVKNIDLVKMLCRIMDELAVHLPVKPSKQLIT
FVKDRAGHDRRYAIDATKIKTELGWAPLVTVEEGLRQTIGWYLTHRTWWEPLLSEEYQAY
YRQVYPS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
ttggccgttcagtatagttacgataacacgagcaatcgctcaccccattgcattctgatt
acggggggggcggggtttattggctcaaactttgtgcatcattggtttagtgcctatccc
gatgaccggattgtggttttagatgctttgacctatgcgggaaatctgcaaaatattgtt
agtttggaacataaccctaattttcgatttgtgcaaggggatatttgcgatcgcccttta
attgatagtttattaaaagaagaacagatcaatactattgcccattttgccgcagaatcc
cacgttgatcggtcaattattggccccggtgcttttgtacaaaccaatgtagtcggcaca
tttactcttttagaagccttccgtcaatattggatagcccagggtcaaccggaacattat
cggtttctgcacgtttctaccgatgaagtttatggaagtctgggcccgaatgatcatgct
tttactgaacagactccttatactcctaatagtccctattctgcctcaaaagcgggcagt
gatcatctagccagggcctattatcatacctatggaatgccgacaattattactaattgt
tctaataattatggcccctatcattatcctgaaaaactaattccgttaatgtgtattaac
gctttattaggaaaaccccttccagtttatggcgatggtgaaaatgtgcgagattggttg
tatgttttagatcattgtcgggctttagatgcggtaattcataacggaagaattggggaa
acttataatattgggggaaataatgaagttaagaatattgatttagttaaaatgttatgt
cggattatggatgaattggctgtccatttacccgtaaaaccttctaagcaattaattacc
tttgttaaagatagggctggacatgatcgaagatatgccattgatgcgactaaaattaaa
acggaattaggctgggctccgttagtaactgttgaagaagggttacgtcaaactattggc
tggtatttaactcaccggacttggtgggaacccttattatcagaagaatatcaagcctat
tatcgacaggtctacccgtcttaa
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