Planktothrix agardhii: NIES204_04900
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Entry
NIES204_04900 CDS
T05658
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_04900 (radA)
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NIES204_04900 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_16
AAA_22
GvpD_P-loop
ABC_tran
NTPase_1
ATPase_2
AAA_5
nSTAND3
AAA_14
DUF7125
TPR_TTI1_C
PAXNEB
NACHT
AAA_24
Rad51
MCM
AAA
DAP3
AAA_29
A2L_zn_ribbon
DZR
DUF7564
NPHP3_N
NESP55
Motif
Other DBs
NCBI-ProteinID:
BBD53227
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Position
583619..585205
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AA seq
528 aa
AA seq
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MAKSRTLYVCNECGAEFPQYFGRCSACHAWNSLEEQVEQPAPTPSQRFSWSNLTGESPEG
LAEVTKPGQPRASFLLSQISDQSQSRMPSGYGELDRVLGGGIVPGSLVLIGGEPGIGKST
LLLQVAHILSHTKRVLYVSAEESGQQVKLRSQRLEVAADSETETETETETETEPENGNQQ
PPTPTADPFTEQLKNRHPKTESATTAITEKDLYLLPETDLEVILRELESLKPQLAVIDSI
QTVFFSSLTSAPGSVAQVRECTSALMQVAKRENITLLIVGHVTKDGGIAGPRVLEHLVDT
VLYFEGDRFASHRLLRSMKNRFGATHEIGVFEMVAHGLKEVSNPSELFLGNRDDFSPGTS
TVVALEGTRPIVVEIQALVSPASYGSARRATTGVDSGRLLQILAVLEKRVGIPLSKLDAY
VASVGGLKVEEPAADLGIAIAIVASFRDRVVDPRTILIGEIGLGGQVRPVSQLELRLREA
AKLGFKRAIIPKGQSPADLGLQIIPVSKVIDAIIASIPAQPPTMNDEF
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtctcgtaccctttatgtttgtaacgaatgtggagccgaatttcctcaatat
tttggccgatgctccgcttgtcatgcctggaattccctagaagaacaagttgaacaaccc
gcacctacgccttcccaacgctttagttggagtaacctcaccggagaaagcccagagggt
ctagcggaagtgactaaacccggacaaccccgtgcttcttttctattatcccaaatttcc
gatcaatcccaatctcgaatgccatcgggttatggagaattagatcgggtattggggggt
ggaattgtgccgggttctttggtattaattgggggagaaccgggaattggtaagtctacc
ttgttattgcaagtcgcccatattctgtcccacaccaagcgggtgttatatgtgtcggcg
gaagaatcgggacaacaggtaaaattgcgatcgcaacgtttagaagttgctgctgatagc
gaaaccgaaaccgaaaccgaaaccgaaaccgaaactgaaccagaaaatggcaatcaacaa
cctccaaccccaacagcagatccctttaccgaacaactgaaaaatcgtcaccccaagaca
gaatctgcgactactgccatcaccgaaaaagatttatatttactccctgaaaccgattta
gaagtaattttaagagagttagaatccctaaaaccgcagttagcagtaattgatagtatt
cagacggtttttttctccagtctgacctctgcacccggttcggtggcgcaggtgcgtgaa
tgtacttccgccttaatgcaagtagctaaacgggaaaatattaccctattaattgtcggt
catgtcaccaaagatgggggcattgccgggccgcgggtgttagaacatttagttgatacg
gtattatattttgaaggcgatcgctttgcttcccatcgcttattacgttcgatgaaaaac
cgttttggcgccacccatgaaatcggggtgtttgaaatggtcgcccatggattaaaagaa
gtttctaatccctcagaattatttttaggaaatcgagatgacttttcccctggaacctca
acggtggtagctttagaaggaactcggccgattgtggtggaaattcaagccttagttagt
ccagccagttacggttcggcgcgacgggcgacaactggggtagatagtggccgattatta
caaattctagcggttttggaaaaacgggtagggattcccctgtctaaattggatgcttat
gtggcgtcggtggggggtttaaaagttgaagaacctgcggcagacttagggatagcgatt
gcaattgtagcgagtttccgcgaccgggtagttgaccctcggactattttaattggggaa
atcggtttagggggacaggtgcgcccggtgtctcaattggaattacggttaagggaggcg
gccaaactgggatttaaacgggcgattatccctaaaggtcagagtccggcggatttaggg
ttacaaattattccggtaagtaaggtgattgatgcgattattgcttccatccccgcccaa
cctccaaccatgaatgatgaattctga
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