Planktothrix agardhii: NIES204_06780
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Entry
NIES204_06780 CDS
T05658
Name
(GenBank) putative succinate dehydrogenase flavoprotein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00020
Citrate cycle (TCA cycle)
pagh00190
Oxidative phosphorylation
pagh00650
Butanoate metabolism
pagh00720
Other carbon fixation pathways
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01120
Microbial metabolism in diverse environments
pagh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NIES204_06780
00650 Butanoate metabolism
NIES204_06780
09102 Energy metabolism
00190 Oxidative phosphorylation
NIES204_06780
00720 Other carbon fixation pathways
NIES204_06780
Enzymes [BR:
pagh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NIES204_06780
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Thi4
Pyr_redox_2
Lycopene_cycl
FAD_oxidored
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BBD53405
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Position
822922..824649
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AA seq
575 aa
AA seq
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MLEHDVIIVGGGLAGCRAAVEMARTNPSLNIAIVAKTHPIRSHSVAAQGGIAATLKNIDE
SDSWQAHAFDTVKGSDYLADQDAVEILAKEAPDVIIDLEHLGVLFSRLPDGRIAQRAFGG
HSHNRTCYAADKTGHGILHELVSNLRRYGVHIYDEWYVLRLILEDGQAKGVVMFRIDDGQ
LTVVRAKAVMFATGGYGRAFNTTSNDYASTGDGLAMAAMAGVPLQDMEFVQFHPTGLYPV
GVLISEAVRGEGAYLINSNGERFMATYAPSRMELAPRDITSRAITLELRAGRGINPDGSA
GGPYIYLDLRHLGREKIMSRIPFCWEEAHRLLGIDAVVEPMPVRPTVHYSMGGIPTNING
QVLSGADSFVDGLFSAGEAACISVHGANRLGSNSLLECVVYGKRTGAAIAQFVQNRKLPN
IDEQRYLKETALQLQGLLDQSGDYRIGKLRQEFQDAMTSHCGVFRTDTVMREGLSQIQEL
QNRYQRIYLDDKGKCWNTELIEALELKSLMIVGNMILTSALSRQESRGAHSREDYPQRHD
ETFLKHTLAYYSPAGIDLAYRPVKITLFEPQERKY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctagaacatgatgtgattattgttgggggcgggttggcaggatgtcgggcggccgta
gaaatggcccggactaaccccagcctgaatatagctattgttgccaaaactcaccccatc
cgttcccattccgtcgctgcccaagggggtattgctgccaccttaaaaaatattgatgaa
agtgatagttggcaagcccacgcctttgataccgtcaagggttcagactatttagctgac
caagatgctgtcgaaattttagccaaagaagccccggatgtaattattgatttagaacat
ttgggcgtattattttcccgtcttcccgatggccggattgctcaacgggcttttgggggc
cattcccataatcgcacttgttacgctgctgataaaacaggtcatgggattttacacgaa
ctggtcagtaacctgcgacgctatggtgtccatatctatgatgaatggtatgtgctgcgt
ctgattttagaagacggacaggccaaaggggtggtcatgttccgaattgatgatggacag
ttaaccgttgtccgggctaaggcggtgatgttcgccaccgggggctatggtcgggcattt
aataccacttccaatgactatgcctcaaccggggacgggctggcgatggcggcaatggcg
ggggttcccttgcaagatatggaatttgtccagttccatcctacgggactatatccggtg
ggggtgttaatttccgaggctgtgcggggggaaggagcctatttaattaatagtaatggg
gagcggttcatggcgacttatgccccgagtcggatggaattagcacctagggatattact
tctcgcgcgattactttagaactgcgggcaggccgtggaattaaccccgatggcagtgcc
ggggggccctatatttatttggatttgcgacatttaggacgggaaaaaattatgagtcgg
attcccttttgttgggaagaagctcaccgtttattaggaattgatgcggtggtggaaccg
atgcctgtacgtcccacggttcactattctatgggaggtattcccactaatattaatggt
caagttttaagtggtgcggatagttttgttgatggattattttccgccggagaagccgct
tgtatatcggtgcatggagctaatcgtttaggcagtaattctttattagaatgtgtggtt
tatggaaaaagaaccggggcggctattgcccaatttgtgcaaaatcgcaagttaccaaat
attgatgaacagcgttatttgaaagaaactgcattgcaattacaaggtttattagaccag
tctggagactacagaattggaaaactgcgtcaggagtttcaagatgctatgacctcccat
tgtggtgtatttagaaccgatacagttatgcgagaagggttaagtcaaattcaggagtta
cagaatcgttatcaacggatttatttagatgataaaggcaaatgttggaatacagaatta
attgaagcattggaattaaaaagtctgatgattgtaggaaatatgattttaacttcggcc
ttaagtcgccaagaaagtcgaggcgcccatagtcgggaagattatcctcaacgccatgat
gaaaccttcctaaaacatactttagcctattattcccctgcgggtattgatttagcctat
cgtccggtaaaaattaccctatttgaaccccaggaacgtaaatattaa
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