KEGG   Planktothrix agardhii: NIES204_07620
Entry
NIES204_07620     CDS       T05658                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pagh  Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:pagh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pagh03400]
    NIES204_07620
DNA repair and recombination proteins [BR:pagh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NIES204_07620
    Archaeal homologous recombinant proteins
     NIES204_07620
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_21 AAA_29 Rad50_zn_hook RNA_helicase
Other DBs
NCBI-ProteinID: BBD53488
UniProt: A0A2Z6CAQ2
LinkDB
Position
905030..908140
AA seq 1036 aa
MIPQKLTLKNFLSYREATLDFSGLHTACICGSNGSGKSSLLEAMAWAIWGESRAESKDDI
IYMGELETQVDFIFISQGNLYRVIRNRRRGQSGTLEFQVATTVLQEIEDLDQIKFRTLTE
KGIAPTQQKIIDYLKLDYDTFTNSAYLRQGKADEFMIKRPAERKEILANLLKLDQYDGLS
DKAKDLAKSYKSQAEILEQTLTSNQVQIDQKGQLEQDIIQLQNTIDQLQEKQAQDRDQYQ
QLQAQQHHRQSWEKLLTGQQQQHQTFAQDYRRLQQELVTTQQQRQELEAVLKQETEIQTG
YNNFITLQTTEETLSVQFKIYQDSQQQRQQLQEQQRQHLNTLQQQIQSLQARLEALTQQE
QDYLQILSQKTDIEAGLEQLQTARNRLTQFDQLQLEVTPILQQRQRLQTELDRAQSRQQA
RLDELKTSVGKLQRTIKHHRPQLEQQSQTIVNKIIELDKKKVYQIRVREKGQERHNFIDR
LNTVKRDYEEKLVELDQKIKLLSKSESEETETAELPLLRSQFPPCPLCDRPLDEHHWNLV
ISKQQNQQQEFRNEIWMIHEQLVVADREIKILQEEYRQIQEDLLPYEELREHRGKIQAQL
EGLDQDEQQLQQLILEEKAVQNILDTGNYATDLYAELQDLEHKLSQLNYNEQSHALARNE
EKRWRWAEIKYSQIRDAQDKLTKINTQKPELETKIQSLTQSLTEEKNNSKIQQKIIILEQ
KINQMGYNVEEHNRIRTELRQAQIWLTRTEQLNQAKQQYPILQKRLQELETITQERVKNL
QAIQGQIELLQEQLKETPDPTESLKQLEQLIQQQRLKLDHYLGQFGSLQQQQTQLDNLNA
QQIEIKTQLDTTRRQYRVYDELAKAFGKNGIQALMIENVLPQLEAETNQILSRLSSNQLH
VQFVTQRTSGRGSKSSKNAPKMIETLEILIADARGTRSYETYSGGEAFRINFAIRLALAK
LLAQRAGTSLQMLIIDEGFGTQDAEGCDRLIAAINAIASDFACILTVTHIPSLKEAFQAR
IEVNKTSQGSQIYLSI
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgattccccaaaaactgaccctaaaaaatttcctgagttatcgagaagcgaccctagat
tttagtggattacataccgcttgtatttgcggttccaacgggtcaggaaagtcatcttta
ttagaagcaatggcttgggcaatttggggggaaagtcgggcagaatcgaaggatgatatt
atctatatgggagaattagaaacccaggtcgattttatatttattagtcagggaaactta
tatcgggtgattcgtaaccgccgccgtggtcaatcgggaaccttagaatttcaagtagca
accaccgttttacaagaaattgaagatttagatcaaattaagtttcgcacccttacagaa
aagggaatagcccccactcaacagaaaattatagactacttaaaactagattatgatacc
tttactaattccgcctatttgcgtcagggaaaagccgatgaatttatgatcaaacgtccc
gccgaacgtaaagaaattctggctaatttattaaaattagatcaatatgatggcttatca
gataaagccaaagacttagccaaaagttataaatcccaagcggaaattttagaacaaacc
ttaaccagtaatcaagtccaaatcgaccaaaaaggtcaactggaacaggatattattcaa
ctacaaaataccattgatcagcttcaggaaaaacaagcccaagatcgagatcaatatcaa
caactacaagcccaacaacatcatcgtcaatcttgggaaaagttattaacaggacaacaa
caacagcatcaaacctttgctcaagactatcgcagattacaacaggaattagttactact
caacagcaacgtcaagaattagaagcagtattaaaacaagaaacggaaattcaaaccgga
tataataattttatcaccctacaaaccaccgaagaaaccctatcggttcaatttaaaatc
tatcaagattcccaacaacaacgccaacaattacaagaacaacaacgccaacatctaaac
accttacaacagcaaattcaaagtctacaagctcgtttagaagcgttaacccaacaggaa
caagattacttacaaattttaagccaaaaaactgatattgaagcgggattagaacagtta
caaaccgctcgtaatcgtttgactcagtttgatcaattacaattagaagttactcccatt
ttacaacagcgtcaacgcttacaaacggaattagatcgggctcaatctcgtcaacaagca
cggttagacgaattaaaaacctccgtcggaaaattgcaacgtactatcaaacatcatcgc
ccccaattagaacaacaatcacaaactattgttaataaaattattgaactggataagaaa
aaagtttatcaaatacgagttcgagaaaaaggacaggagcgccataattttattgaccgt
ttgaatacggttaaacgggattatgaagaaaaattagtcgaactagatcagaagatcaaa
ctattatcaaaatcggaatccgaggaaacagaaaccgccgaattaccgttattgcgatcg
cagtttcccccttgtcctctttgcgatcgccccctagacgaacatcactggaatttagtt
atttctaaacagcaaaatcaacaacaggaattcagaaatgaaatttggatgatccatgaa
cagttagtagttgcggatcgagaaattaagattttacaggaagaatatcgacaaattcaa
gaggatttattaccctatgaagaattgcgagaacaccgaggaaaaatccaagctcagtta
gaaggattagatcaagatgaacagcaattacaacaattaattttagaagaaaaagccgtt
caaaatattttagatacgggtaattatgcaacggatttatatgcagaattacaggatcta
gagcataaattaagccaactcaattataatgaacaaagccatgcgttagctaggaatgaa
gaaaaacggtggcgttgggcggaaattaaatatagtcaaattcgagatgctcaagacaaa
ttaaccaaaattaatactcaaaaaccagaattagaaaccaaaattcaatccttaacccaa
agtttaactgaagaaaaaaacaactctaaaattcaacaaaaaattataattttagagcaa
aaaattaaccaaatgggttataatgttgaggagcataatcgcatccgtacagaattgcgt
caagctcaaatttggttaactagaaccgaacaattaaaccaagccaaacaacaatatcct
atcctgcaaaaacgccttcaagagttagaaaccatcacccaagaacgggtaaaaaaccta
caagcaatccaaggacaaattgaactattacaagaacaattaaaagaaactcccgacccg
acagaatcattaaaacaattagagcaattaattcaacaacaacgactaaaattagatcat
tatttaggacaatttggcagtttacaacaacaacaaactcaattagataatttaaacgct
caacaaatcgaaattaaaacccaattagataccacccgccgtcaatatcgagtttacgat
gaattagcaaaagcctttggtaaaaatggaattcaagccctaatgattgagaatgtttta
ccccaattagaagcagaaaccaatcaaattttatctcgattatcctcaaatcaactccat
gttcaatttgttacccaacgtactagcggacggggtagtaaatcctcaaaaaatgctcct
aaaatgattgaaaccttagaaattctaatcgcagatgcgcggggaactcgctcctatgaa
acctattctggaggggaagcctttagaattaattttgccattcggttagccttagcaaaa
ctattagcacaacgggcgggaacttctctacaaatgttaattattgatgagggatttgga
actcaagacgctgaaggttgcgatcgtttaattgcggctattaatgcgatcgcttctgat
tttgcttgtattttgactgtcacccatattcctagtttaaaagaagcttttcaagctaga
attgaagttaataaaactagccaaggttctcaaatttatctctcaatttaa

DBGET integrated database retrieval system