Planktothrix agardhii: NIES204_08620
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Entry
NIES204_08620 CDS
T05658
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00860
Porphyrin metabolism
pagh01100
Metabolic pathways
pagh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NIES204_08620 (cobD)
Enzymes [BR:
pagh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
NIES204_08620 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
BBD53588
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Position
1015632..1016630
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AA seq
332 aa
AA seq
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MTDFNSLIIILIAAVGDYLIGDPKNWLHPVQVMGWIITYYTQIFFKYFDQPRILRVAGVF
LTLIVVLGSALTVALIREGVRVLVVKFSGPEILTIAVESILLASCFAGRSLRDSAEDVLY
WIDQGDLVTARQRLSRYVGRDTETLSESEILRAVLETVTENATDGVMAPLFYALIGAVLP
GVGSVPLTFAYKAASTLDSMVGYREAPYGDIGWFSAKLEDVLTWLPCRLTVIMIAILSGK
PGYVFSICQRDAVFDPSPNAGWSECAYAAALGVQVGGENSYRGVIKQKPFLGDPQQPITS
TTIKQALQLTRYSFLITLGLFTGGFILFNMGN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggattttaattccctaatcattatattgattgctgctgtgggtgattatctgatt
ggagatcccaaaaattggttacatccagtgcaggtgatggggtggataattacttactat
actcaaattttctttaaatactttgatcaaccgagaattctgcgggtggcgggggtattt
ctgaccctaattgtggtattggggagtgctttgacagtggcgttaattagagagggggta
cgggtgctagttgtcaaattttcggggcctgaaattttgaccattgcggtagaaagtatt
ctcctggccagttgttttgcgggtcggagtttaagggattccgccgaggatgttttatat
tggattgatcaaggagatttagttacggctcgtcaacgattaagtcgttatgtaggtcga
gataccgaaaccctatcggaatcagaaatccttagagcggttttagaaaccgtgacagaa
aatgccaccgatggcgtcatggctcctttattttatgccttaattggtgcggtattacct
ggggtcggtagtgtccctcttacttttgcctacaaagccgctagtaccctcgattctatg
gtcggttatcgagaagcaccctatggggatataggatggtttagtgccaaattagaggat
gttttaacttggcttccctgtcgattaacggtgatcatgatcgctatattatcaggaaaa
cctggttatgttttcagcatttgtcaacgggatgctgtttttgatccgagtcccaatgcg
ggatggagtgaatgcgcttatgccgccgccctgggggtacaagtagggggggaaaattcc
tatcggggggtgattaaacagaaacctttcttgggagatcctcaacaaccgattacatca
actaccattaaacaagcattacaactgactcgatatagttttttaatcacgttaggatta
tttacagggggatttatccttttcaacatgggaaattaa
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