Planktothrix agardhii: NIES204_09260
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Entry
NIES204_09260 CDS
T05658
Symbol
ociD
Name
(GenBank) ABC-transporter ATP-binding protein McnF
KO
K02471
vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
Organism
pagh
Planktothrix agardhii
Pathway
pagh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES204_09260 (ociD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pagh02000
]
NIES204_09260 (ociD)
Transporters [BR:
pagh02000
]
ABC transporters, eukaryotic type
Other subfamilies
Other ABC transporters
NIES204_09260 (ociD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
ABC_membrane
SMC_N
AAA_21
nSTAND1
AAA_16
AAA_29
AAA_30
NACHT
AAA_22
RsgA_GTPase
Adeno_IVa2
AAA
AFG1_ATPase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BBD53651
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All DBs
Position
1115132..1117195
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AA seq
687 aa
AA seq
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MSPQVSQDQATTNPISNVTKFWASVKAIAAPYWYPTITGGRAFSDVIKSWAMLILLIGII
LTVVGLNALNSFVSNYLVDVIIAKDNFDKFVKTLVVFAVGLLFVTLLVGLLKFLRKRIAL
DWYEWLNSWILAKYFSDRAYYKINFKSDLDNPDQRLSQEIEPITSNALSFFTVCLENVLE
MITFLVILWFISPFVAILLVVWTVIGNAIAIYLNQALNKITQEELELKANYNYALTHVRT
HAESIAFFDGETQELNIIQRRFNNLLNSAKHKIDWERGTEIFNRGYQAAIQVFTFVILGP
LYMNSDGISFGQVGQACLAANLFASALGELISEFGTSGRFSSYVERLSEFSQALEEVVKQ
PENVSTIKTIEENHFAFENVTLQTPDYEQVIVENLSLSVQPGQGLLIVGPSGRGKSSLLR
AIAGLWNAGTGRLVRPPLEEVLFLPQRPYIILGTLREQLLYPNRNQEKSEAELREVLQQV
NLQNLLNRINGFDTEESWENVLSLGEQQRLAFARVLITRPSFTILDEATSALDFKNEGNL
YQQLQKTNTTFISVGHRESLFNYHQWVLELSEDSHWQLLTVQDYRRQKAEEISSVPGDNS
QARVENSPHQQAAMKPQINSSEELLLESPTTTILTEEGLSHAQMTKLSNYSVSSIRNLAS
RGKSITGNDGLTYHYDKDPKILKWLRI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccaagtctctcaagatcaagcgacaactaatcctatctccaatgtcaccaaa
ttttgggcaagtgtaaaggcgatcgcggccccctattggtatccgactataacgggggga
agagctttttccgatgtgattaaatcttgggcaatgctgattttattaatcgggataatt
ctaaccgttgtgggtttaaatgccttgaatagttttgtgagtaattatttagttgatgtt
atcattgccaaggataattttgataaatttgtcaaaactttggtggttttcgcggttgga
ctgctctttgttacacttttggttggattgcttaaatttctcagaaaaagaatcgctctg
gattggtatgaatggctcaatagctggattctagcaaaatatttcagcgatcgcgcttat
tacaaaattaattttaaatccgatttagataacccagatcaacgcctatcccaggaaatt
gagccaattaccagtaacgccctcagtttttttacggtttgcctagaaaatgtcctagag
atgatcacttttttagtaattctctggttcatttctccttttgttgccattcttttagtc
gtttggacagtcatcggtaacgccattgctatctatctaaaccaagccttaaataaaatt
acccaagaagaattagaacttaaagctaattacaattatgctctaactcatgttcggact
catgcggaatcaatcgctttctttgatggagaaacccaagaattaaatattattcagcgt
agatttaataatcttttgaacagtgctaaacataaaattgattgggagagaggcacagaa
atatttaatcggggctatcaggcagcgatccaagtatttacctttgtcattctagggcct
ttgtatatgaatagtgatggcattagtttcggacaggtcgggcaagcctgtttagcggct
aatttgtttgctagtgcgctaggggaattaatcagtgaatttgggacttcgggacgattt
agcagttatgttgaacgtctatcggaattttctcaagccctagaagaagtcgttaaacaa
cccgaaaatgtaagcacgattaaaaccatcgaagaaaaccattttgcctttgaaaatgtg
actttgcaaactcccgattatgaacaggtaattgttgaaaacctttccctttctgttcag
cctgggcaaggtctattgattgtcgggccgagtggtcggggtaaaagttccttgcttcgg
gcgatcgctggtttatggaatgcaggaacaggccgattagtgcgcccccccctagaagaa
gtattatttctgccccaacgtccctatataatattaggaaccttgcgagaacagttactt
tatcccaatcgcaatcaagaaaaaagtgaggcagaattaagagaagttttacaacaagtc
aatctccaaaatctgttaaatcgaatcaatggttttgatacagaagagtcttgggaaaac
gttttatctctaggagagcaacaacgtttggcttttgctagggtattaattacccgtccc
agttttactatcctagatgaagccaccagtgctttggactttaaaaatgagggtaattta
tatcagcaattacaaaaaactaacacaacttttattagtgtcggacatcgggaaagtctc
tttaactatcatcaatgggttttagaactttctgaggattcccattggcaactgctgaca
gttcaggactatcggcgacaaaaagctgaagaaattagtagtgttcctggcgataattcc
caagctagagtcgaaaattcacctcatcagcaagccgcaatgaaacctcaaattaattct
tccgaggaactcctccttgaatctccaacgacaacaatcctgacagaagaaggactttcc
cacgcacaaatgacgaaattaagcaactattccgtcagtagtattagaaacctagccagt
cggggaaaatccattacgggaaatgatggacttacctatcactatgataaagaccctaaa
atcttaaaatggctaagaatttag
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