Planktothrix agardhii: NIES204_10310
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Entry
NIES204_10310 CDS
T05658
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NIES204_10310 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagh03016
]
NIES204_10310 (trmU)
Enzymes [BR:
pagh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
NIES204_10310 (trmU)
Transfer RNA biogenesis [BR:
pagh03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
NIES204_10310 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
QueC
Arginosuc_synth
Asn_synthase
ThiI
DUF7411
Motif
Other DBs
NCBI-ProteinID:
BBD53751
LinkDB
All DBs
Position
complement(1261072..1262160)
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AA seq
362 aa
AA seq
DB search
MRKVVVGLSGGVDSSAAAALLHHQGYEVVGLTLWLMKGKGQCCSEGMVDAAYICEQLGVP
HHIVDSRDLFQTHIIDYLVDGYREGITPLPCSQCNRTVKFGPMLNYAREQLGIDRIATGH
YARIEYDEKSDRYQLKRALDRNKDQSYFLYDLTQDLLAATLFPLGEILKTETRQIANQYE
LKTADKPESQDLCLVEANGSMQAFLDKYITGKKGDIIDTKGQVLGQHEGIHHYTIGQRKG
LGISAPNPLYVVGIDAGRNQVIVGDKESAVQTECAIKRVNWVGIGTPNTPIRAQVQIRYR
SEPQPVTVIPIHPPDGAEIDPKIGSCVKLIFDEPIFGITPGQAAVWYDGDLVLGGGIIDI
QK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagttgttgtaggtctttcgggtggagtcgatagttccgccgccgccgccctg
ctacaccaccaaggttatgaggtggtgggcttaaccctttggttgatgaagggaaaagga
caatgctgttctgaagggatggtagatgcagcctacatttgtgaacaattaggtgttcct
catcatattgtggatagtcgagatttatttcaaacccatattatagactatttggtggat
ggataccgggagggaattacccccttaccctgttctcaatgtaatcggacggtgaaattt
ggcccgatgttaaattatgctcgggaacagttaggaattgatcgaattgccacgggtcat
tatgctagaatcgaatatgatgaaaagagcgatcgctatcaattaaaacgagccctagac
cgcaataaagatcagtcttatttcttatacgatttaacccaagatttacttgctgcaact
ctatttcccctgggagaaattttaaaaactgaaacccgtcaaattgctaatcaatatgaa
ttaaaaaccgccgacaaacccgaaagtcaagatttatgtttagtagaagcgaatggctcc
atgcaggcttttttagataaatatattacgggaaaaaaaggcgatattattgataccaag
ggtcaagttttaggacaacatgaaggcattcatcattataccattggacaacgcaaaggc
ttaggaatttcggctcccaatcccctatatgttgttgggattgatgcgggtcggaatcaa
gtgattgtgggggacaaagaaagtgcggtacaaactgaatgtgcgattaaacgagtaaat
tgggtggggatagggacacctaacacccccattcgtgcccaagtccaaattcgctatcgg
tcggaaccccagcccgttaccgtgattccgattcatcccccagatggagcagaaattgat
cccaaaatcggttcctgcgttaaactcatttttgatgaacccatctttgggattactccg
ggtcaagcagcagtttggtatgacggagatttagttttaggtgggggaattattgatatt
caaaaataa
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