Planktothrix agardhii: NIES204_11770
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Entry
NIES204_11770 CDS
T05658
Name
(GenBank) nuclease SbcD family protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_11770
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES204_11770
Archaeal homologous recombinant proteins
NIES204_11770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BBD53893
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Position
1429236..1430456
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AA seq
406 aa
AA seq
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MIKILHLSDIHLGSGFSHGQINPETGLNTRLEDFTATLGRCIDRAIAEPVDLVLFGGDAF
PDATPAPYVKQAFAAQFRRLVDAEIPTVLLVGNHDQHSQGQGGASLGIYRTLGVPGFVVG
DSLATHTIQTHNGAIQIITLPWLTRSTLLTRPETEGLSLEAVNQLLIDRLTVVLEGEIRQ
LNPELPTILLGHLMADKANLGAERFLAVGKGFNIPLSLLTRSCFEYVALGHVHKHQNLNR
TNDPPVIYPGSIERVDFSEEKEDKGFILIEVEKGQVKWQFCPLTVRSFCTIKVDLSKSDD
PLQALIKVIEKNHIQDAVVRLIYQLRSDQLDLINNTELYQLLSAAHSYTIKPELVSQLAR
PRLPELDSGSSIDPMDALKTYLTSREDLLGFQTEMIEAAQLLLAGE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatattgcatctttcggatattcatttaggaagtggtttttcccatggacaa
atcaatcctgaaacgggcttaaatactcgcctagaggactttacggctaccttgggacgc
tgtattgatcgagcgatcgcagaaccagtggatttggtcttatttggcggagatgccttt
cctgatgcgactcccgccccctatgtcaaacaagcctttgccgcccaatttcggcggtta
gtggatgcagaaattcccacggttttattagtaggaaatcatgatcaacattcccaggga
caagggggagccagtttagggatttatcgaacattaggagttcccggttttgtagttggg
gatagtttagcaacccataccattcaaacccacaacggtgcgattcaaattattacttta
ccttggttaactcggtcaactttattaactcgtcccgaaacagaaggattatctttagaa
gccgttaatcaactcttaattgatcgtttaaccgtcgttttagagggagaaattcggcaa
ttaaacccggaattaccgacaattttattagggcatttgatggcggataaagccaattta
ggagcggaaaggtttttggctgttggtaagggatttaatattcccctgtctttattaact
cgctcttgttttgagtatgtagcattaggtcatgtccataaacatcaaaatctgaatcgg
actaatgatcccccggttatttatccagggagtattgagcgagtggattttagcgaagaa
aaagaagacaaaggatttattttaattgaagtcgaaaaaggtcaagttaaatggcaattt
tgtccgttaactgtgcgatctttttgtacaattaaagtggatctttctaaatctgatgat
cctctccaagccttaattaaagtgattgaaaaaaatcacatccaagatgcagttgttcgg
ttaatttatcaactgcgttccgatcaattagatttgattaataatacagaattataccag
cttttgagtgccgcccatagctatacaattaaaccggaattagttagccaattagccaga
cctcgtttacctgaattggattctggtagcagtattgatcccatggatgcgctcaaaacc
tatttaaccagtcgggaagatttactaggatttcaaaccgaaatgatcgaagcggctcaa
ctgctattagcgggagaataa
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