Planktothrix agardhii: NIES204_13050
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Entry
NIES204_13050 CDS
T05658
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase, Icd
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00020
Citrate cycle (TCA cycle)
pagh00480
Glutathione metabolism
pagh00720
Other carbon fixation pathways
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01120
Microbial metabolism in diverse environments
pagh01200
Carbon metabolism
pagh01210
2-Oxocarboxylic acid metabolism
pagh01230
Biosynthesis of amino acids
pagh04146
Peroxisome
Module
pagh_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NIES204_13050 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
NIES204_13050 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NIES204_13050 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NIES204_13050 (icd)
Enzymes [BR:
pagh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
NIES204_13050 (icd)
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
BBD54021
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Position
complement(1564975..1566399)
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AA seq
474 aa
AA seq
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MYDKITPPTTGEKVTFNNGEPIVPNNPIIPFIRGDGTGIDLWPATEKVLDAAIAASYGDQ
RKISWFKVYAGDEACELYGTYQYLPEDTTTAIREYGVAIKGPLTTPIGGGIRSLNVALRQ
IHDLYACVRPCKYYTGTPSPHKTPEKLDVIIYRENTEDIYLGIEWRQGSEIAEKLIHFLN
TELIPATPEHGKKQIRLDSGIGIKPISKTGSQRLVRRAIYQALRLPKNKQMVTLVHKGNI
MKYTEGAFRDWGYELATTEFRNECVTERESWILGNKEKNPDLSLEDNARQIEPGYDSLTP
EKKAEISQEVEGVLNTIWETHGNGKWKEKIMVNDRIADSIFQQIQTRPDEYSILATMNLN
GDYLSDAAAAMVGGLGMGPGANIGDECAIFEATHGTAPKHAGLDRVNPGSLILSGVMMLE
YMGWQEAADLIKKGLSGAIANQEVTYDLARLMEPPVEPLKCSEFADAIIKHFND
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacaaaatcactccaccgaccacaggcgagaaagttaccttcaacaatggcgaa
cccattgtcccgaataatccgattattccgttcattcggggagatggtacagggattgac
ctctggcccgctaccgagaaagttttagacgcggctattgcagcctcctacggagatcaa
cgtaaaattagttggtttaaagtctacgccggggacgaagcctgcgaactctacggcact
tatcaatatttaccggaagacaccaccaccgccatcagggaatatggtgtcgccatcaaa
gggcctttaactactcccatcggaggcgggattcggtctttaaatgtggcattacgacaa
attcatgatctgtatgcctgtgtacgtccgtgtaaatattacactggaaccccttccccc
cacaaaaccccagaaaaattagatgtgattatctatcgggaaaataccgaagatatttat
ttaggaattgaatggcggcagggatcagaaatcgcggaaaaattaattcattttctgaat
acggagttaattccggcgactcctgaacatgggaaaaaacaaattcgccttgattctggc
attgggattaaacccattagtaaaactggttctcaacggttagttcgtcgggctatttat
caagcgttgcgtctacctaaaaacaaacaaatggtgacgctggtgcataaaggtaatatt
atgaaatataccgaaggagccttccgagattggggttatgaactggcaactacggaattt
cgcaatgaatgtgtcaccgaacgggaatcttggattttagggaataaagaaaaaaatccc
gatctatctttagaggataatgctcgtcaaattgaaccgggttatgattccctaactcct
gagaaaaaagcggagatttctcaagaagtggaaggagttcttaataccatttgggaaact
cacggtaatgggaaatggaaggaaaaaattatggtcaatgaccggattgccgatagtatt
ttccaacagattcaaacccgtcccgatgagtattctatcctggctacgatgaacttaaac
ggggattatttatccgatgcggctgccgccatggtcggaggtttaggcatgggcccaggg
gcaaatattggcgatgaatgtgctatttttgaggcaacccatggcactgcacccaaacac
gccggactggatcgggttaacccaggatctctgattctatcgggggtgatgatgttagaa
tatatgggttggcaagaagccgctgatttgattaaaaaagggttaagtggagcgatcgct
aatcaagaagtcacttatgatttagctcggttaatggaacccccggttgaacccttgaaa
tgttcagaatttgctgatgcaattattaagcatttcaatgattaa
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