Planktothrix agardhii: NIES204_13810
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Entry
NIES204_13810 CDS
T05658
Symbol
gyrA_1
Name
(GenBank) DNA gyrase A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagh03032
]
NIES204_13810 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_13810 (gyrA_1)
Enzymes [BR:
pagh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NIES204_13810 (gyrA_1)
DNA replication proteins [BR:
pagh03032
]
Prokaryotic type
DNA Topoisomerases
NIES204_13810 (gyrA_1)
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES204_13810 (gyrA_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
p31comet
PucR
Motif
Other DBs
NCBI-ProteinID:
BBD54093
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Position
1638285..1640942
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AA seq
885 aa
AA seq
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MSTSESRIVPTDLRNEMQQSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMNELGLTPD
RPFRKCARVVGEVLGKYHPHGDVAVYDALVRMAQDFSMRSPLINGHGNFGSVDNDPPAAM
RYTECRLQALTSDSLLRDIDSETVAFGDNFDGSQQEPLVLPARIPQLLLNGSSGIAVGMA
TNIPPHNLGELIDGLLALIHNPEITIAELMRHIPGPDFPTGAQILGTSGIKEAYNDGRGS
ITMRGIATIETIEHKGRPDREAIIVTQLPYQTNKAAMIERIAEMVNDKKLEGISDIRDES
DRDGMRIVIELKRDAYPRVILNNLYKQTPLQTNFGANMLALVNGRPEILTLKRFLEVFLH
FREQTIRKRTEYELRKAQERDHLLLGLLIALDNLDAIIALIRHAADIPIAKQELITNYGL
SEQQADAILQMQLRRLTALESQKIDQEHQELQIKIADLEDILARRERILVIVEDEALEIK
QKFNTPRRTVIEHTEGELEDTDLIANEKALILLTEQGYMKRMPVNTFAAQSRATKGKQGT
KMKEDDGVEHFITCCDHDTILFFSNRGVVYSIRAYQIPASSRTARGVPIIQMLPIPKEER
ITSIVHVSEFSDDEYLVMLTKGGFIKKTQLSAFSNIRTNGLIAISLEDGDELRWVRRAKV
DDGIIIGSRHGMAIHFKANNKQLRPLGRATRGVKSMKLKGDDTLISMDILPSAIISNFAE
AEGEEIETDDELMLTTVAITEEENETETEVVAEVNSLGLSVLVITASGYGKRVPVSQFRL
QNRAGKGIIATKFKPHAKKDEVVALKVVDETHELMLISSRGIIIRQVVNAIPLQSRSATG
VRVQRLYEEDSIAAVAIVPASGEEDAESLSNSEESGESGESGEEE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctctgagtcgagaattgtcccgacggatctcagaaatgaaatgcagcagtcc
tacctagaatacgccatgagcgtaatcgtaggccgagcgctgccagatgcacgggatggt
ttgaaacccgttcaccgtaggatcttgtacgcgatgaacgaactgggcttaacacccgat
cggcccttccgtaaatgcgcccgtgtggtgggggaggtactcggtaaatatcacccccat
ggagatgtggccgtttatgacgccttagtgcggatggcacaggatttttccatgcgatcg
cctttaattaacggtcatggcaactttggatcggtggataatgatcctccggcggctatg
cggtatacggaatgtcgtctacaggccttaaccagtgattctctcctgcgagatattgat
tcagaaaccgtggcctttggcgataacttcgatggatctcaacaggaacccttagtttta
cccgcacgaattccccaattactattaaatggatcttcgggaattgctgtggggatggcg
actaatattcccccccacaatttaggagaattaattgatggtttactggcattaattcat
aatcctgagattactattgccgaattaatgcgccatattcccggcccagattttcctact
ggagcgcaaattttaggcacatcgggcattaaagaagcctataatgatggtcggggttcg
attaccatgcgcgggattgctaccattgaaaccatcgaacataaaggtagacccgatcga
gaagcaattattgtcacccaactaccttatcaaaccaataaagccgcgatgattgaacgc
attgctgaaatggttaatgataagaaattagagggaatttccgatattcgtgatgaaagc
gatcgggatgggatgcggatcgtaattgaactcaaacgggatgcttaccccagagttatc
ctcaataacctctacaaacaaacgcccctacaaaccaattttggggcgaatatgttagcc
ctagttaatggtcgtcctgagattctcaccctcaaacgcttcttagaagtattcctgcat
tttcgggaacaaactatccgcaaacgcacggaatatgaactcagaaaagctcaagaacgg
gatcatcttttactgggattattaattgccttagacaatttagatgcaattattgcctta
attcgtcatgcggcagatattcccatagctaaacaagaattaattactaactatgggtta
tctgaacaacaagccgatgccatcttacaaatgcaattgcgacggctaacagctttagaa
tcccaaaaaattgaccaagaacaccaagaattacaaataaaaattgctgatttagaggat
attttagctagacgagaacgaattttagtaatcgttgaagatgaagccctagaaatcaaa
caaaagtttaatacccctcgtcgtactgtgattgaacatacagaaggcgagttagaagat
accgatttaattgccaatgaaaaagccttaattctgttaacagaacagggctacatgaaa
cgaatgcctgttaatacttttgctgcccaaagtcgagccacaaaaggtaaacaaggcaca
aaaatgaaagaggatgatggagttgaacactttatcacctgttgcgaccatgacacgatt
ttattctttagtaatcgtggtgtagtttacagtattagagcctatcaaatcccggcttca
tcccgcacagccaggggggttccgatcatccaaatgttacccattcccaaggaagaacgg
atcacttctattgttcatgttagcgaatttagcgatgatgaatacttagtaatgttaacc
aaaggtggatttattaagaaaactcaattatccgcctttagtaatattagaactaatggt
ttaattgctatttccttagaagatggagacgaattacgctgggtgagacgggcaaaagtt
gacgatggcattatcattggttctcgtcacggtatggcaattcattttaaagccaataat
aaacaattgcgaccgttaggaagggcaacccgtggcgttaaatccatgaaattgaaaggg
gatgataccttaatcagtatggatattttgcccagtgcaattatttctaatttcgctgaa
gcggagggagaagaaattgaaaccgatgacgaattgatgctcacaacggtagcaattacc
gaggaagaaaacgaaacagaaaccgaagtagtagcggaggttaactccctaggactatcg
gttttagtcataaccgctagtggttatggaaaaagggttccagtgtctcaattccgctta
caaaatcgggctggaaaagggattattgccaccaagtttaaaccccatgctaagaaagat
gaagtagtggctttaaaagtcgtggatgaaacccatgaattaatgttaattagcagtcga
gggattattattcgtcaagtcgtgaatgccattcccctacaatctcgaagtgctactggg
gttcgtgttcagcgattatacgaggaagattccattgccgcggtggccattgttcccgct
tccggggaagaagatgccgaaagtctatccaattctgaagaatctggagaatctggggag
tctggggaagaagaataa
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