Planktothrix agardhii: NIES204_14090
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Entry
NIES204_14090 CDS
T05658
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NIES204_14090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_14090
Enzymes [BR:
pagh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NIES204_14090
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NIES204_14090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBD54120
LinkDB
All DBs
Position
complement(1671091..1671780)
Genome browser
AA seq
229 aa
AA seq
DB search
MSDHEQLSLFDFKNTEPAAPLINLNRDLIPTDAKIAIPLGTYQTLEEIANHCNHCYRCEL
GQNRTHAVIGRGNIQAPIMIIGEAPGQNEDEQGLPFVGRSGQLLEKILESVGLTTDKEVY
ISNAIRCRPPNNRTPTPQEIEACKPYLLEQIRLVNPKIILLTGATAVKSLLGDKRGISKI
RGQWMEWEGRLCMPIFHPAYLLRNPSKEQGSPKWLMWQDIQEVYNKLNE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcacgaacaattgagtttatttgattttaaaaatactgaacctgctgctccg
ttaataaatttgaatcgggatttaattccgactgatgctaaaattgcgattcctttagga
acttatcaaaccttagaagaaattgctaaccattgtaatcattgttatcgttgtgaatta
gggcaaaatcgtacccatgcggtcattggtagaggtaatattcaagcgccaattatgatt
atcggagaagcaccggggcaaaatgaagatgaacagggtttaccctttgttggcaggtcg
ggacaactgttagaaaaaattttagaatccgtgggtttaactacggataaagaggtttat
atttctaatgccattcgctgtcgtccgccgaataatcgcactcctaccccgcaagaaatc
gaagcctgtaaaccctatttattagaacaaattcgtttagttaatccaaaaattatttta
ttaaccggagcaacggcggttaaatctttattaggagataaacggggaattagtaaaatt
agagggcaatggatggagtgggaagggcgattatgtatgccaatttttcacccagcttat
ttattaagaaatccctctaaggaacagggatcaccgaaatggttaatgtggcaagatatt
caagaagtttacaataaattgaatgaataa
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