Planktothrix agardhii: NIES204_15830
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Entry
NIES204_15830 CDS
T05658
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagh03016
]
NIES204_15830 (truB)
Enzymes [BR:
pagh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NIES204_15830 (truB)
Transfer RNA biogenesis [BR:
pagh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIES204_15830 (truB)
Prokaryotic type
NIES204_15830 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Channel_Tsx
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BBD54293
LinkDB
All DBs
Position
1864427..1865320
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AA seq
297 aa
AA seq
DB search
MYGFINLNKSAGFTSHDCVARVRRILRLKRVGHAGTLDPAATGVLPMALGKATRLLQFLP
SHKAYHARIKFGVTTTTDDLEGETLTVQSVPHLQLEQIQEILPQFIGKIEQVPPIYSAIH
VQGKRLYHLARKGEVIQVPSRTVEVFDLKILNWYPGEFAELEIAIACGSGTYIRSIARDL
GAILNTGATLANLIRTESSGFDLENSLTLETLETQVQQQTFSPLSPNIPLNHLTKIILNY
ESIKRWFQGQSIVVENQIIEDRPVSVYDQNQQLLGIGKLIETPDQILLAPQIVLTEN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggtttatcaaccttaataaatctgccggattcacctcccatgactgtgtggcg
cgagttcgccgaatattacgattaaaacgggtcggacacgcgggaacccttgatcccgca
gcaactggagtattaccaatggccttgggaaaagccactcgtttattgcaatttctccct
tctcataaagcttatcatgctagaattaaattcggtgtcaccaccaccaccgatgactta
gaaggagaaaccttaactgttcaatctgtaccgcatttacaacttgaacaaattcaagaa
attctccctcaatttatcggtaaaatcgaacaagttcctcctatttatagtgcgattcat
gttcaaggaaaacgcttatatcatttagccagaaaaggagaagttattcaggttcccagt
cggacagtcgaagtttttgatctgaaaattcttaattggtatcctggggaatttgccgaa
ttagaaattgcgatcgcctgtggttcaggaacctatattcgctctattgctagggattta
ggagctatacttaatactggagctactttagctaatttaattagaaccgaaagtagtggt
tttgatttagaaaatagtctaaccttggaaaccttagaaacccaagttcaacagcaaacc
ttttcgcccctatctccaaatattcctttaaatcatttaacaaaaattatcctaaattat
gaatcaataaaacgttggtttcaaggacaatctattgttgtagaaaatcaaataatagaa
gatcgtcccgtgagtgtctacgatcaaaatcaacaactattaggaataggaaaattaatc
gaaactcccgatcaaattctcctcgctcctcaaattgttctcaccgaaaattaa
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