Planktothrix agardhii: NIES204_20130
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Entry
NIES204_20130 CDS
T05658
Symbol
clpB2
Name
(GenBank) ClpB protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pagh03110
]
NIES204_20130 (clpB2)
Chaperones and folding catalysts [BR:
pagh03110
]
Heat shock proteins
HSP100
NIES204_20130 (clpB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
IstB_IS21
nSTAND3
Mg_chelatase
AAA_14
ATPase_2
RuvB_N
AAA_18
AAA_24
TniB
AAA_7
Zeta_toxin
AAA_28
AAA_3
ABC_tran
NACHT
NBD_SMAX1
T2SSE
DNA_pol3_delta2
Torsin
Motif
Other DBs
NCBI-ProteinID:
BBD54717
LinkDB
All DBs
Position
complement(2330316..2333165)
Genome browser
AA seq
949 aa
AA seq
DB search
MQPTDPTKFTDKAWEAVVKSQDVARRFQNQNLEVEHLITALLEQNGLATNLMSRAGVDTD
IFGQQLEAFTKRQPRVGRIEHLYLGQSLDILLDKAEEARQTLQDGFISIEHLILAFSEDD
RIGRKLLAGEQPTSQRPGRPGYDRPSSAPSIRPKLEEAIKAIRGSSKVETQSPETSYEAL
KKYGKDLTELAKAGKLDPVIGRDEEVRRVVSCLSRRTKNNPVLIGEPGVGKTAIAEGLAQ
RIVNGDVPESLKNRQLISLDMGSLIAGAKYRGEFEERLRSVLREVTHSEGQIVLFIDELH
TVVGAGSGGGSSGMDASNLLKPMLARGELRCIGASTVDEYRKHIEKDPALERRFQQVYVD
QPSPEDTISILRGLKDRYERHHGVKITDSALVAAAMLSSRYISDRFLPDKAIDVVDEAAA
QLKMEITSKPVELEQIDRRVMQLEMEKLSIEGESLGTGESNRRNDGGVALRLGRIKEEIE
SLKTKQEKLASQWQGEKHLLDSINKLKEDEEELRVQIEQAERAYDLNKAAQLKYGQLEVL
HQEREGKEAELVKLQSQGSSMLREEVTEADIAGIIAKWTGIPVNRLLESERQKLLRLESH
LHQRVIGQQEAVAAVSAAIRRARAGMKDPGRPIGSFLFMGPTGVGKTELAKALAEFLFDS
EESIIRIDMSEYMEKHAVSRLVGAPPGYVGYDEGGQLSEAVRRHPYSVILFDEVEKAHPD
VFNILLQVLDDGRITDSQGRTVDFRNTVIVMTSNIGGEHILDVAGDESRYGEMEKRVMTA
LRSHFRPEFLNRVDDIILFHPLSKGELRYIVTIQVKRIQRLLSDQKISIELSPTTLDYLA
DIGYDPVYGARPLKRAIQRELENHIANLLLEQKFITGDTIYVDNVDDKLVFNHQPLIPKP
KEEPLIMNVQPLRKNTSDPLEMDVKPVILNTSKTAEGDDIITVETVKDE
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgaccgatccgacaaaatttacagataaagcctgggaagccgtggttaaatcc
caggatgtggcgcgtcgttttcaaaatcagaatttagaagtcgaacatctgatcaccgcc
ctactggaacaaaatggactcgccactaacctcatgagtcgggcgggagtcgatacggat
atttttggccaacagttggaagccttcaccaaacgtcaaccccgagttggacgcattgaa
catttatatttgggacaaagccttgatatcctattagataaggcagaagaagctcgtcaa
accctacaagatggttttatctccatagaacatttaatcctggctttctcagaagatgac
cgcattggtcgtaaactcttagccggagaacaacctaccagtcaacgccccggacgtccg
ggttatgatcgcccatcaagtgctccctccatacgtcccaaattagaggaggcgattaaa
gcgattcgaggtagttcaaaagtcgaaacccaaagcccagaaaccagttatgaagcctta
aaaaaatatggtaaagacttaacagaactcgctaaagctggaaaacttgatccggtgatc
ggtcgggatgaagaagtccgtcgggtggtcagttgtttatctcgcagaactaaaaataat
ccggttttaattggcgaaccaggagtaggaaaaaccgccattgcggaaggtttagctcaa
agaattgtgaacggagatgtgccagaatccttaaaaaatcgccagttaatttccctagat
atgggtagtttaattgccggggcaaaatatcggggagaatttgaagaaagactgcgatcg
gtattaagagaagtcacccattccgaagggcaaattgtattatttattgatgaattgcat
accgttgtcggggcgggttccgggggcggttcgtcaggaatggatgcgagtaatttatta
aaaccaatgttagcccggggagaattgcgttgtattggcgcttcaaccgttgacgaatat
cgtaaacatattgaaaaagatcccgccttagaaagacggtttcaacaagtttatgtcgat
caaccttctcctgaagataccatatcaattttaagaggattaaaagatcgttatgaacgc
catcatggggtaaaaattactgatagtgctttggtagccgcggcaatgttatcaagtcgt
tatattagcgatcgctttttaccagataaagccattgatgttgtcgatgaagccgccgcc
caattaaaaatggaaataacttctaaacccgttgaattagaacaaattgatcggcgggta
atgcagttagaaatggaaaaattatccatagaaggagaaagtttaggaacgggagaaagt
aaccgccgaaatgatggcggggtagcccttcgtttaggcagaattaaggaagaaatagag
agtttaaaaaccaaacaggaaaaactcgcctcccaatggcaaggggaaaaacacctatta
gatagtattaataaactcaaggaagatgaagaagaattaagggtacaaattgaacaggca
gaaagggcctatgatttaaacaaagccgcccaattaaagtatggtcaattggaagtttta
catcaagaacgggaaggcaaagaagcggaattagttaagttacaatctcaaggttcttcg
atgttgcgcgaggaggttacagaagccgatatcgcggggattattgctaaatggactggt
atacctgttaaccgtttattggagtcagaacggcaaaaattattgcgcttagagagtcat
ttacatcaacgggtaatcgggcaacaggaggcagtggcggccgtttctgctgctattaga
agggcgcgggcggggatgaaagatcccggtcgtccgattggatctttcctgtttatgggg
ccaacgggggtgggaaaaaccgagttggcgaaggcgttagcagagtttttatttgatagt
gaggagtcgattattcggattgatatgtctgaatatatggaaaaacacgcggtttcccgg
ttggtgggggcacctccgggttatgtgggttatgacgagggcggtcaactatcggaagcg
gtgcgacgtcatccctattcggtgattttatttgatgaagtcgaaaaagcccatcccgat
gtgtttaatattttattacaagtattagatgatggccgaattaccgactcccaaggaagg
acggttgattttagaaataccgtaattgtaatgaccagtaatattgggggggaacatatt
ttagatgtggcgggggatgagtcccgttatggggaaatggagaagcgagttatgacggct
ttgcgatcgcattttcgccccgaatttttaaatcgggtggatgatattattctattccat
ccgttaagtaaaggggaattacggtatattgtgacgattcaagttaaacggattcaaagg
ttattatcggatcagaaaatatccattgaattatcgcctacaaccttagactatttagct
gatattggttatgatcctgtgtatggagctagaccattaaaacgagcaattcaacgggaa
ttagaaaaccatattgctaatttattattagaacaaaaattcataacgggagatacaatt
tatgtggataatgtagatgacaaattagtgtttaatcatcaacctttgattcctaaaccg
aaagaagaaccgttaattatgaatgttcaaccgttgcgaaaaaacacatctgacccatta
gaaatggacgttaaacccgtgatattaaacacttctaaaacagcagagggggatgatatt
attaccgttgaaacggtgaaagatgaatag
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