Planktothrix agardhii: NIES204_21680
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Entry
NIES204_21680 CDS
T05658
Name
(GenBank) CRP/FNR family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pagh
Planktothrix agardhii
Pathway
pagh02020
Two-component system
pagh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIES204_21680
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES204_21680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pagh03000
]
NIES204_21680
Transcription factors [BR:
pagh03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
NIES204_21680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR
HTH_24
HTH_IclR
TrmB
MarR_2
GntR
HVO_A0261_N
Penicillinase_R
HTH_36
Staph_reg_Sar_Rot
Motif
Other DBs
NCBI-ProteinID:
BBD54871
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Position
2488398..2489108
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AA seq
236 aa
AA seq
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MEDRYFSRDNHSDIHKMICSTPFFQGLPPDAADKATSHIVGRNHPANQVILLENDWGSSV
YFILDGWVKIRTYNLDGKEVTLNILGKGELFGEMAALDEVPRSTDVITLAPTLIGNMPAQ
DFVELITTEPKAGMRLAQLMGRRLRQVNRRLRLRESDSTSRVADILLFLAEGQGTTSDQG
GTQIPNLPHRELSGLSGLARETVTRVLSKLEKKGLIHRERDILSIPDVHALERILV
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcggtatttctcccgtgacaatcactctgatattcacaagatgatctgctca
acgcctttctttcaaggcttgccaccggatgcggcggataaagcaacctctcatattgtg
ggtcgaaaccatccagccaaccaagtgattttattagaaaatgactggggaagttccgtt
tattttattctggacggttgggttaaaattcgtacctataatttggatggtaaagaagta
acgctgaatattttgggtaagggtgaactatttggagaaatggcagcactcgatgaagtc
ccccgctccaccgatgttattacattagcgccaaccttaattgggaatatgccggctcag
gattttgtggagttgattaccaccgaacccaaggcgggaatgcgactagctcaattgatg
ggacggcgtttacgccaggtgaatcgacgtctgagattgcgcgaatctgatagtacatcc
cgggttgccgatattctcctatttctggcagagggccaaggtacaacttcagatcaaggc
ggaacacaaattcctaatcttccccatcgggagttaagtggtttgagtggtctggctcgg
gaaaccgtaactcgggttctgagtaagttagagaaaaaaggattaattcatcgggaacgg
gatattttgagtattcccgatgtccatgccctagaacggatattagtctga
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