Planktothrix agardhii: NIES204_22140
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Entry
NIES204_22140 CDS
T05658
Name
(GenBank) nucleic acid-binding OB-fold tRNA/helicase-type protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh03030
DNA replication
pagh03430
Mismatch repair
pagh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES204_22140
03430 Mismatch repair
NIES204_22140
03440 Homologous recombination
NIES204_22140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagh03032
]
NIES204_22140
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_22140
Enzymes [BR:
pagh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES204_22140
DNA replication proteins [BR:
pagh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES204_22140
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES204_22140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
tRNA_anti_2
Intein_splicing
CDC24_OB3
HROB
PC4
Motif
Other DBs
NCBI-ProteinID:
BBD54914
LinkDB
All DBs
Position
2532268..2533686
Genome browser
AA seq
472 aa
AA seq
DB search
MVKIISRKSLGTQAVYDIGVQEDHNFVLSNGLVASNCFNKSHSMAYAYVTYETAYLKANY
PVEYMAALLSANSGDTDKIQKYIESCQKSLGIKVIPPDINLSGMDFTPSDKSIIFGLSAI
KNVGEGAIEHLLEIRQEGGEFKSFPDLCDRINLQMVNSRALEALIKCGALDKLNPNRRQA
IDHLDKLISWAQSKAKDRAVGQQSIFDILGGGTNTKDTHEDAPKPAKLEDFKVQEKLQFE
KELLGFYVSEHPLKSILRSISVDERVTLSELTDKKSKVKVVVVITAIKLHTTKKGDRMAF
LQIEDLTGQMEAIIFPKTYQEIKTFPKENDVVLITGKTDKQEDKLQLIIDELQSADTLPR
IDKIPALLLEDLEIEESNSMVLLHLKLEEIYDLSRLQKLHALLKEQSSGNQKQANIPIVA
TVKGEFKPSNKGICLGRDFWIQNAEATIDSLKNAGFDAEIQPKLEILMSIQA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaattattagtcgaaaatctttaggaacccaagcagtttatgatattggcgta
caagaagatcataactttgttctcagcaatggtttagttgcttctaattgctttaataaa
tcccattccatggcctatgcctatgttacctatgaaaccgcctatttaaaagcaaattat
cccgttgaatatatggcagctttattaagtgcaaatagtggagatacggataaaattcaa
aaatatattgaatcttgtcaaaaatccctgggaattaaggtgatcccgcccgatataaac
ctttcgggaatggattttaccccctcggataagagtattattttcggactttctgcgatt
aaaaatgtcggggaaggtgcgatcgaacatttattagaaattcgtcaagaagggggagaa
tttaagagttttcctgatttatgcgatcgcattaacttacaaatggtgaatagtcgcgcc
ttagaagccttaattaaatgtggagctttagataaacttaaccccaaccgtcgccaagct
attgatcatttagataaattaatttcttgggcgcaaagtaaagccaaagatcgagccgtg
ggtcaacaaagtatattcgatattttagggggtggaactaatacaaaagatacccatgaa
gatgcacccaaacccgcaaaacttgaggattttaaagttcaggaaaaactccaatttgaa
aaagagttactggggttttatgtttctgaacatcctttaaaatctatcttaagatcgatt
tctgtagatgaaagagtgactctatcagaattaacggataaaaaatctaaagttaaagta
gttgttgtaatcactgctattaaactgcataccaccaaaaaaggtgatcggatggcgttt
ttacaaatcgaagatttaaccggacaaatggaagcaattatttttcctaaaacctatcaa
gaaatcaagacttttccgaaggaaaatgatgtggttttaatcacgggtaaaactgacaaa
caggaagataaacttcagcttattattgatgagttacaatcggcggatactctccctcgg
attgataaaattccggctcttttattggaagatttggaaatagaggaatcaaattcaatg
gtacttttacacctaaaacttgaggaaatttatgatttatcccgacttcaaaaacttcat
gcactactaaaagaacaatcttcgggtaatcaaaaacaagctaatattccaattgttgct
acggttaaaggagaatttaaacctagtaataaagggatttgtttaggtcgtgatttctgg
atacagaacgccgaagcaacaattgattccttaaaaaacgctggatttgatgctgaaatt
caaccaaaattagagatattaatgtcaattcaagcctaa
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