Planktothrix agardhii: NIES204_26910
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Entry
NIES204_26910 CDS
T05658
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NIES204_26910 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_26910 (ruvB)
Enzymes [BR:
pagh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES204_26910 (ruvB)
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES204_26910 (ruvB)
RecFOR pathway proteins
NIES204_26910 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_2
Rad17
AAA_14
AAA_3
AAA_16
TIP49
nSTAND3
Sigma54_activ_2
MCM
AAA_25
TsaE
bpMoxR
AAA_18
AAA_24
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BBD55384
LinkDB
All DBs
Position
complement(3028285..3029418)
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AA seq
377 aa
AA seq
DB search
MAIISSKKQSPEPEPSDEFSGLATPMAKKSRKSKNSEPTDELDYLLEAEATPEEEINRQQ
DEKIRPHRLEDYVGQKDLKEVLSIAIAAAKSRQEPLDHLLLYGPPGLGKTTMSLILASEM
GVTCKITTAPALEKPRDIAGLLVSLKPGEVLFIDEIHRLSKVAEEILYPAMEDCRLDITI
GQGRSAKTRSIPLKPFTIVGATTRVGSLTAPLRDRFGIIQRLRFYEVDELSLIVQRSAKL
LNTPITPEGAIEISQRARGTPRIANRLLRRVRDYVQVKSTGEINAEVANIALEVFNVDPL
GLDWTDRNMLTAIIEKFKGGPVGLETMAAITGEDTQTIEEVYEPYLMQIGFIQRTNRGRV
ATPAAWKHLGLDHPENS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgattatttcttcaaaaaagcagtcccctgaacccgaaccgtctgatgagttttct
gggttggcgactcccatggctaaaaaatccagaaaatccaagaatagtgagccgacggat
gaattggattatttgttagaagcggaagcgacacccgaagaagaaattaatcgtcaacag
gatgagaaaatccgaccccatcgtttagaagattatgtgggacaaaaggatttaaaagag
gttttatcaattgcgatcgcggccgcgaaatcccgtcaggaacctttagatcatttatta
ttatatggccccccaggattaggaaaaaccaccatgtccctaattttagcttcggaaatg
ggggtgacttgtaaaattaccacggctccagccttagaaaaacccagggatattgcggga
ttattagtcagtttgaaaccaggggaagtattatttattgatgaaattcatcgcttatct
aaagtggcggaggaaattttatatccggcgatggaggattgtcgattagatattactatt
ggtcagggaagatcggcaaaaactcggagtattcccctgaaaccttttaccattgttggt
gctacaacccgggtaggttccttaacggctcccctgcgcgatcgctttggaattattcaa
cggttacgcttttatgaagtagacgaattaagtttaattgttcaacgaagtgcgaagtta
ttaaatactcctataaccccagaaggcgcgatcgaaatttcccaacgggctaggggaaca
cctagaattgctaatcgtttattgcgtcgagttcgggattatgtacaggtgaaaagtaca
ggagaaattaatgcagaagtggcgaatattgctttggaagtatttaatgttgatccccta
ggattagattggacggatcgaaatatgttaacggctattattgagaaattcaaagggggg
ccagtgggattagaaaccatggcggcaattacgggggaagatacccaaactattgaagaa
gtttatgaaccctatttaatgcaaattgggtttattcaacggacaaatcgaggtcgtgtg
gcgacgcctgcggcttggaaacatttgggattagatcatcctgaaaatagttaa
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