Planktothrix agardhii: NIES204_27960
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Entry
NIES204_27960 CDS
T05658
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pagh
Planktothrix agardhii
Pathway
pagh02010
ABC transporters
pagh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES204_27960
03070 Bacterial secretion system
NIES204_27960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pagh02000
]
NIES204_27960
02044 Secretion system [BR:
pagh02044
]
NIES204_27960
Transporters [BR:
pagh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES204_27960
Secretion system [BR:
pagh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES204_27960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
cNMP_binding
SMC_N
AAA_22
AAA_21
ABC_ATPase
AAA_18
AAA_30
AAA_29
AAA_16
AAA_23
DUF87
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
BBD55488
LinkDB
All DBs
Position
3150701..3153712
Genome browser
AA seq
1003 aa
AA seq
DB search
MTTSAVSQSQIQTFLAETTPFDRLSEKALQNLLPKCQLLGYRTGQPIFERDKLPTQITII
YQGQARLLGFDPRAQRHVSLGLLGAREIIGWAGLIRGVPCETAIASTDTICITLAAADFL
QWVVKEQAFGEAFRDQAGLSEVFDLLSQHLQAQAVPVNNIKNLAVDLGQDAVVLNLAAGN
KKTKELTSLLDPNRIWLVSSGTLGGFAPGSRFLLEESNSSYKIEGPQGVRLVGLREPVYE
VETSVETADGEVSVQDSNNGNGNRTIDLSAVTSAPEVPPTPETNVPKSALKFPVVRGRGK
IDAPLACFNMIAKFFGISFKKDVVRRVLDNQLATVGNISLQACGAVTQMLGINAQLVQVP
SKAIGRLKAPAMVVWKDSFAILYSITEREIILASPEKGLARMRPGQFAEIWGEEGQVLLL
QAPRVDQKEQFSFWWFLPALMEHRATFVEVLLSSFFIQVFGLVNPLVSMVIIDAVIAQQN
LDALNVLGILLLGFALFEGLLTALRTYLFVDSSNRVDIKLTAEIIDHMLRLPLGYFDSRQ
VGDLMSRFNELGNIRNFLTGTALTVVLDAVFSVVYIAVMVALSPTLTLVALAPLPLFAGI
IFVFSPVIMRLIRKRAGLGGTSMAYIVEVISGIQTIKSQTIELTARWRWQGMYARFMSAS
LQTTLTQTAAGTMSDFLNKIGGIALLWVGAYLVIEQQLTIGGLIAFRIISGNVTGSLLRF
ISVYQQIQEVSISVERLRDIIDTLPEADEADRNNIPLPEIEGSVTFEEVSFRFNPTGPLQ
LANINLDFPSGSFVAIVGLSGSGKSTLMKLLQRLYAPLSGRILIDGYDINKVELYSVRRQ
LGVVLQDTLLFNGTVQDNIGLSNPEASSDEIIRAAKIAAAHDFIMGLPNGYNTQVGERGS
ALSGGQRQRVAIARTVLQNPKLLILDEATSALDYQSERAVINHLMDVFHDRTVFFITHRL
SAVKNADVIIMMDQGSVVEQGNHDELVALKGRYYCLYQQQEAP
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatccgccgtttctcaatcccaaattcagaccttcttagctgaaacgactccc
tttgatcgactctcggagaaggcacttcagaacctgttgcccaaatgccaactcctgggc
tatcgtaccggacaaccgatctttgagcgggataaattgccgactcaaatcacgattatt
tatcaaggacaggctcgattgctggggtttgatcccagagcgcaacgccatgttagtttg
ggcttgctcggagccagagaaatcatcggttgggcggggttaattcgaggagttccctgt
gaaaccgcgatcgcttcaaccgacacgatttgtattacgttggcggccgcggattttttg
caatgggtcgtaaaagaacaggcttttggagaagccttccgagatcaagccgggttgagc
gaagtttttgacctgttaagccaacatctacaggcccaggccgttccggttaacaatatc
aagaatttagcagttgatctagggcaggatgccgttgtactgaacttggcggcgggtaac
aagaaaaccaaggaattgactagcttacttgatcctaatcggatttggttagtcagtagt
gggactttggggggttttgccccaggtagccggtttttattagaagaaagtaattcatct
tataagattgaagggccccagggcgttcggttagtggggttgcgagagcctgtttatgaa
gtggaaacctcggtagaaaccgccgatggagaggtgagtgttcaagactcgaataatggc
aacggtaatcgcaccatcgatctatcggcggtgacttcggctcctgaagtcccccccact
ccagaaactaatgtcccgaaatcggctctgaagtttcccgtagttcggggtagaggcaag
attgacgcgcctctagcttgctttaatatgattgctaagttcttcgggattagctttaaa
aaagatgttgttcgtcgtgttttagataatcagttagcaacggttggtaatattagtttg
caggcttgcggggccgtgacccaaatgttgggaatcaatgctcagttagtccaggtgcca
tccaaagccattggtcgcctcaaagccccggccatggtggtctggaaagatagctttgcc
attctctatagcattaccgaacgggaaatcatcctggcatccccggaaaagggtttagcc
cggatgcgtccagggcagtttgcggaaatttggggtgaggaaggacaggtactcctgtta
caagcgccccgagttgatcaaaaagaacaatttagcttctggtggtttctcccggccttg
atggagcatcgagcaacatttgtggaggtgttgctgtcttcgtttttcatccaagtgttc
ggtttagttaaccccttagtcagtatggtgatcatcgacgcggtgatcgcacaacagaac
ttggatgctctgaacgtcctggggattctactgttagggtttgctctgtttgaaggttta
ttaacggcgttacgaacctatctgtttgtggatagctccaaccgcgttgatatcaaactc
acagcagaaattattgaccatatgttgcggctacccttgggttactttgatagccgccag
gtcggggacttgatgagtcgttttaacgagttaggaaatatccgtaacttcctaacgggg
acagccttaacggtggttttggatgcggtgttctcggtggtctacatcgccgtgatggtt
gccctaagtccaactctgaccctggtggctttagctcccttacccctatttgctggaatt
atttttgtcttctccccggtgattatgcggttaatccgcaaacgggcaggtttggggggg
acatccatggcctatattgtggaggtgattagtggaattcaaaccattaaatcccaaact
attgaattaacagcccgttggcggtggcaaggaatgtatgcccgtttcatgagtgcgagt
ttacaaaccactcttacccaaacggccgcgggaaccatgagcgacttcctgaataaaatt
ggggggattgccctgttatgggttggtgcctatctagtcattgaacagcagttgaccatc
gggggattaattgcctttcggattatctctggaaacgtcacgggctcgttattacggttt
attagtgtttatcaacagatccaagaggtgtcgatttcggtggaacggttgcgggatatt
attgatacccttcctgaagccgatgaagccgatcgcaataatattcccttacctgaaatt
gaagggtcagttacctttgaggaggtgtccttccgattcaatcccacggggcccctgcaa
ctggctaacatcaatttagattttccctccgggtcgtttgtggcgattgtggggttgagt
ggatcgggtaaaagtaccctgatgaagttattgcagcgtctatatgctcccctatcggga
cgaattttaattgatggctacgatattaataaagtggaactctattctgtccgccgtcaa
ttgggggtggtattgcaggataccctcctatttaacggaaccgttcaggataacatcggc
ttgagtaaccccgaagccagtagcgacgaaattattcgggcggctaaaattgctgcggcc
cacgattttattatgggtcttcccaatggttacaatacccaggtcggagaaaggggatcg
gctttatccgggggacaacgacaacgggtggccatcgcccgcacggtattacaaaatcct
aaactgttaattttggatgaagccaccagtgccctagactatcaatcggaacgggctgtg
atcaatcacttgatggatgtctttcacgatcgcacggtcttttttattactcaccgtctg
agtgccgtcaaaaacgcggatgtaattattatgatggatcaaggatctgtggttgagcag
ggaaatcatgatgagttagttgccctgaaaggacgttattactgcctgtatcaacaacag
gaagcgccctaa
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