Planktothrix agardhii: NIES204_29780
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Entry
NIES204_29780 CDS
T05658
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00220
Arginine biosynthesis
pagh00240
Pyrimidine metabolism
pagh00250
Alanine, aspartate and glutamate metabolism
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01240
Biosynthesis of cofactors
Module
pagh_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NIES204_29780 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NIES204_29780 (carB)
00220 Arginine biosynthesis
NIES204_29780 (carB)
Enzymes [BR:
pagh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NIES204_29780 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
GARS_A
ATP-grasp_2
ATP-grasp_5
Epimerase
Motif
Other DBs
NCBI-ProteinID:
BBD55662
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Position
complement(3360574..3363807)
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AA seq
1077 aa
AA seq
DB search
MPKRTDIKKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPET
AERTYIEPLVPEIVAKVIEKERPDALLPTMGGQTALNLAVALARNGTLEKYGVELIGAKL
EAIEKAEDRQLFKEAMEKIGVACCPSGIANTMSEAIQVGHQIGSYPLIIRPAFTMGGTGG
GIAYNQEEFEEIAQSGLDASPNSQILIEQSLIGWKEYELEVMRDLADNVVIICSIENIDP
MGVHTGDSITVAPAQTLTDKEYQRLRDASIKIIREIGVETGGSNIQFAVNPVTGDFIVIE
MNPRVSRSSALASKATGFPIAKFAAKLSVGYTLDEINNDITKKTPASFEPTIDYVVTKIP
RFAFEKFPGSEPVLTTQMKSVGEAMAIGGTFCESFQKALRSLETGLAGWGCDRSEKLSSL
DHIRSGLRTPNPERILTVRNAMLLGMTVEEIYELTGIDPWFLDKMQEILETEKFLKRTSL
PELKADKLLAVKRQGFSDRQIAFATKTTEDEVRTYRKGLGVKPVYKMVDTCAAEFESTTP
YYYSTYWEEDEILPSTKPKVMILGGGPNRIGQGIEFDYCCCHASYSLRADGYETIMVNSN
PETVSTDYDTSDRLYFEPLTKEDVLNIIEAEEPEGIIIQFGGQTPLKLALPLQRALEKTT
LKTKIWGTSPDSIDIAEDRERFEKILRELNILQAENGMARSFKEALKVAKRIGYPVVVRP
SYVLGGRAMEIVYSDEELERYMLFAVHVEPDHPILVDQFLQNAIEVDVDAIADQQGNVVI
GGIMEHIEQAGIHSGDSACSIPYQTLSEAAVTTIRRQTIELAKALNVVGLMNIQFAVQGE
NVFILEANPRASRTVPFVSKAIGVPLAKIASRVMSGKSLIELGFTEEIIPTHVSVKEAVL
PFAKFPGTDVLLGPEMRSTGEVMGIDTEFGKAFAKAELAAGQVLPLSGTVFISVNERDKQ
AIVPVVRDFLALGFKVTATIGTRKVLWENEVKVEMELKLHEGRPNILDAIKNQAVQLAII
TPSGEESRSDGILIRRSALAYKIPIITTIAGAKATVAAIHSLKSTPLEVKAIQDYYI
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgtacagacataaagaaaattttgctcctgggttctgggccgattgtgatt
ggacaagcctgtgagttcgactattcaggaactcaagcctgtaaagccctgcgggaagaa
ggctatgaggtggtgttggtcaactccaacccagcgacaattatgaccgacccagaaacg
gccgaacgcacctatattgagcctctagttcccgaaatcgtggccaaggtaatcgaaaaa
gaacgtcccgatgccctattacccacaatgggaggtcaaaccgcccttaacttagccgta
gctttagccagaaatggcaccttagagaaatatggagtcgaactgattggggccaaatta
gaagcgattgaaaaagccgaagatcggcaactgttcaaagaggcgatggaaaaaatcgga
gtagcctgttgcccttcgggaattgccaataccatgagtgaagcgattcaggtggggcat
caaattggtagctaccccttaattattcgtccagcctttaccatgggaggaactgggggt
ggtattgcctataaccaagaagaatttgaagaaattgctcaatcgggtttagatgcgtct
cccaattctcaaattttaatcgaacaatccttaattggttggaaagaatatgaattagag
gtgatgcgggatctggctgataacgtggtgattatttgttcgattgaaaatatcgatccg
atgggagtccatacgggggattcaattaccgtggctcccgcccaaaccttaacagataaa
gaatatcaaagattgcgggatgcttcgattaaaattatccgagaaattggggtagaaacc
gggggatctaatattcaatttgcggttaatcccgtgactggggattttattgtaattgag
atgaatccccgggtgagtcggtcttctgccttagcttccaaagccacgggattcccgatc
gctaaatttgccgcgaaattatcggtgggatataccttagatgaaatcaacaatgatatt
actaagaaaaccccggcttcctttgagcccacaattgattatgtggtgacaaaaattccc
cgctttgcctttgagaaattccctggttcggaacctgttttaaccacacaaatgaagtcc
gtcggggaagcgatggcgattggtggaaccttctgtgaatccttccaaaaagccctacga
tccttggaaactgggttagcaggttggggttgcgatcgctcagaaaaactctctagtttg
gatcatattcgttccggtttacgcacacctaacccagaacgaattttaacagttcggaat
gcgatgctgttgggaatgaccgtagaagaaatctatgaactgaccggaattgatccgtgg
tttttagataaaatgcaggaaattttagaaacggaaaaattcctcaaacggacttcttta
cctgagctaaaagccgataaactgttagcagtaaaacggcaaggatttagcgatcgccaa
attgcctttgccaccaaaaccacggaagatgaagtccgaacctatcgcaaaggattagga
gtcaaacctgtttataaaatggtggatacctgtgcggcggaatttgaatcgaccacaccc
tattactattcaacctactgggaagaagacgaaattttaccgtctacaaaacccaaggtt
atgattttaggcggtggccctaaccgcatcggacaggggattgagtttgattattgttgt
tgtcatgcctcctattctttacgggcggatggttatgaaacaattatggttaactctaac
ccagaaactgtttctaccgactatgatacgagcgatcgcttatattttgaacccctaact
aaagaggatgttctgaatattattgaagcagaagaaccggaaggaattattattcaattc
ggtggtcaaacccctctgaagttagccttacctctgcaacgagccttagaaaaaactacc
ctaaaaaccaagatttggggaacttctcccgactcgattgatattgctgaagaccgagaa
cggtttgaaaaaattctgcgggaattgaatattttgcaagccgaaaacggtatggcccgc
agtttcaaagaagccttaaaagtggcgaagcgcatcggatatccggtggttgtgcgtcct
tcctatgtgttagggggacgggcaatggaaatcgtttattctgatgaagaattggaacga
tatatgctgtttgcggttcatgtcgaacccgatcaccccattttagtcgatcagttcctg
caaaatgccatagaagttgatgtggatgcgatcgccgaccaacagggaaatgttgtgatc
ggtggaattatggaacatatcgaacaggctggaattcactctggggactccgcttgttcg
attccctaccaaaccctatcggaagccgccgttaccaccattcgccgtcaaaccattgaa
ctggccaaggcgttaaatgtggttgggttaatgaatattcagtttgcggtacagggggaa
aatgtgtttattttagaagcaaatccccgggcgtctcgaactgttccctttgtctctaag
gcgattggggttcccttagccaaaattgcttcccgggtgatgtcgggtaaaagtttaatt
gaattgggctttaccgaagaaataattcccacccacgtttctgtgaaagaagccgtgtta
ccctttgctaaattccctggtacggatgtgctgttagggccggaaatgcgctctacaggg
gaagtgatggggattgataccgaattcggcaaagcctttgccaaggcagaactggccgcc
ggacaggtgttacccctatcggggacggtgtttatttcggtgaatgaacgggataaacag
gctattgttcccgtggtgcgggatttcttggctttagggttcaaagttaccgcgactatt
gggactcgcaaagtgctttgggaaaatgaggtgaaagtggagatggagttgaaactgcac
gaaggacggccgaatattttggatgctatcaaaaaccaggcggtgcagttggctattatt
actccttctggggaggagtcccgcagtgatgggattctgattcgtcgttcggctttagcc
tacaaaatcccgattattacaactattgctggggctaaggcgacggtggcagcgattcat
tccttaaagtctactcccctggaagtgaaagcgattcaggattattacatctaa
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