Planktothrix agardhii: NIES204_31560
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Entry
NIES204_31560 CDS
T05658
Symbol
sucD
Name
(GenBank) succinyl-CoA synthetase alpha chain
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00020
Citrate cycle (TCA cycle)
pagh00640
Propanoate metabolism
pagh00660
C5-Branched dibasic acid metabolism
pagh00720
Other carbon fixation pathways
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01120
Microbial metabolism in diverse environments
pagh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NIES204_31560 (sucD)
00640 Propanoate metabolism
NIES204_31560 (sucD)
00660 C5-Branched dibasic acid metabolism
NIES204_31560 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
NIES204_31560 (sucD)
Enzymes [BR:
pagh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
NIES204_31560 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BBD55838
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Position
complement(3552730..3553632)
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AA seq
300 aa
AA seq
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MNLTPDSKVIIQGTTISPSLTHAAVQMKTYKTRVVACVCPGQGGRELSEIPIFDLVEQVI
TNVGEIDISVIFVHPYQVLDAALEAMAAGIRQLIIVTEGMPPLDMVHLVRKAEITETLVV
GPNCSGIIIPDKLLLGTHPVEFYRPGNVGLLSRSSTLTYEVAAELTQGGLGQSVAVSIGS
DFIVGSSFLQWLEILDEDENTDVIVLVGEMGGTSEEEAASYIAESIDTPVIAYVAGLHAP
TTKLLGHASLLMTSKVVKNMVDPGTVESKVSAFKNAEVLVAKQPSEIPILVKKVIKKTKK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaactcctgatagtaaagtcattatacagggtactacaatatcaccctcctta
actcatgcagcggtgcaaatgaaaacatacaaaactcgtgttgtcgcctgtgtctgtccg
ggtcagggaggacgggaattaagtgaaattccgatctttgatttggtagaacaagtaatt
acaaatgtgggtgaaattgatattagtgtaatttttgttcacccctatcaagttttagat
gcggcattagaagcaatggcggcaggaattcgtcaattaattattgtgacagagggaatg
ccccctttggatatggtgcatttagttcggaaggcggaaattacagaaactttagtggtg
ggccccaattgttcgggaattattattcctgataaattgttattaggaacccatccggtt
gaattttatcgacccggaaatgtgggattattaagtcgcagtagtaccctaacctatgaa
gtggcggcggagttaactcaaggaggattaggtcaatcagttgctgttagtattggcagt
gattttattgtgggatcttcgtttctgcaatggttagaaattttggatgaggatgaaaat
acagatgttattgttttagtgggagaaatggggggaactagcgaagaagaagcggcttct
tatattgcggaatctattgatacacccgttattgcttatgttgctgggttacacgctccg
actactaaacttttgggtcatgctagtctattaatgacttcaaaagtggttaagaatatg
gtcgatcctggaacggttgaaagtaaagtttctgcttttaaaaatgctgaagttcttgtt
gctaaacaaccctcagaaattccaatattagttaaaaaagtgataaaaaaaaccaagaaa
taa
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