Planktothrix agardhii: NIES204_32340
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Entry
NIES204_32340 CDS
T05658
Symbol
rbcL
Name
(GenBank) ribulose bisophosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00630
Glyoxylate and dicarboxylate metabolism
pagh00710
Carbon fixation by Calvin cycle
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01120
Microbial metabolism in diverse environments
pagh01200
Carbon metabolism
Module
pagh_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pagh_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NIES204_32340 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
NIES204_32340 (rbcL)
Enzymes [BR:
pagh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
NIES204_32340 (rbcL)
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
BBD55915
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Position
3634188..3635618
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AA seq
476 aa
AA seq
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MSYSQTQTKSKSGYKAGVQDYKLTYYTPDYTPKDTDVLAAFRMSPQPGVPPEEAGAAVAA
ESSTGTWTTVWTDLLTDLDRYKGRCYEVEPVPGEDNQYICYVAYPLDLFEEGSVTNLLTS
LVGNVFGFKALRSLRLEDLRIPIAYLKTFQGPPHGITVERDKLNKYGRPLLGCTIKPKLG
LSAKNYGRAVYEVLRGGLDFTKDDENINSQPFMRWRDRFLFVQEAIEKAQAETGEIKGHY
LNVTAPTCEEMMERAEFAKEIKTPIIMHDYLTGGFTANTSLAKWCRRNGILLHIHRAMHA
VIDRQKNHGIHFRVLAKCLRMSGGDHLHSGTVVGKLEGEKGITMGFVDLMREDHVEVDRS
RGIYFTQDWASMPGVMPVASGGIHVWHMPALVEIFGDDSCLQFGGGTLGHPWGNAPGATA
NRVALEACVQARNEGRNLMREGGDVIREACKWSPELAVACELWKEIKFEFESMDTV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactctcaaacacaaaccaagtccaagtctggctataaagctggtgtacaggac
tataaactgacctattacacgcctgactatacaccaaaagatacagacgttctggctgcc
tttcggatgagtcctcaacctggagtccccccggaagaagctggtgctgctgttgctgct
gaatcctcgactggaacttggacaacggtgtggacggacttactgactgacctcgaccgc
tataaaggtcgttgctatgaagtcgaacccgttcccggtgaagataaccaatatatctgc
tacgttgcctatcctctggatctgtttgaagaaggttccgttaccaacttactgacatct
ttagtcggtaacgtatttggtttcaaagccctgcggtcactgcgtttagaagatttacgc
atccccatcgcttacctgaaaaccttccaaggccctcctcacgggattaccgttgagcgc
gataaattaaacaaatacggtcgtcctctgctcggttgtacgattaaacccaaactcggt
ctgtctgcgaaaaactacggtcgcgccgtttatgaagttctgcgcggtggtttagacttc
accaaagacgacgaaaacatcaactcccagcccttcatgcgctggcgcgatcgcttcctg
ttcgttcaagaagccatcgaaaaagctcaagcagaaaccggggaaatcaaaggccactac
ttaaacgtgaccgcccccacctgcgaagaaatgatggaacgggctgaattcgctaaagaa
atcaaaaccccgatcatcatgcacgactaccttacaggtggtttcactgctaataccagc
ttggccaaatggtgtcgtcgcaatggcattctgctgcacattcaccgtgcgatgcacgct
gtgattgaccgtcagaaaaatcacgggattcacttccgtgtgttagccaaatgcttacgg
atgtctggtggtgaccacctgcactcgggaaccgttgtgggtaaactcgaaggggaaaaa
ggcatcaccatgggcttcgttgacctgatgcgtgaagatcacgttgaggttgatcgctct
cgtgggatctacttcacccaagattgggcttctatgcctggtgttatgcccgtggcttcc
ggtgggattcacgtttggcatatgcccgccctggtggaaatcttcggcgatgactcttgc
ttacagttcggtggtggaaccctcggacatccctggggtaatgctcctggtgctaccgct
aaccgtgtggccctcgaagcttgtgttcaagcgcgtaacgaaggtcgtaacctgatgcgt
gaaggcggcgacgtcatccgtgaagcttgcaaatggtctcctgaactggccgttgcttgc
gaactctggaaagaaatcaagtttgagttcgagtcaatggataccgtctaa
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