Planktothrix agardhii: NIES204_36810
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Entry
NIES204_36810 CDS
T05658
Symbol
nifJ
Name
(GenBank) pyruvate flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00010
Glycolysis / Gluconeogenesis
pagh00020
Citrate cycle (TCA cycle)
pagh00620
Pyruvate metabolism
pagh00650
Butanoate metabolism
pagh00720
Other carbon fixation pathways
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01120
Microbial metabolism in diverse environments
pagh01200
Carbon metabolism
pagh01210
2-Oxocarboxylic acid metabolism
Module
pagh_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NIES204_36810 (nifJ)
00020 Citrate cycle (TCA cycle)
NIES204_36810 (nifJ)
00620 Pyruvate metabolism
NIES204_36810 (nifJ)
00650 Butanoate metabolism
NIES204_36810 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
NIES204_36810 (nifJ)
Enzymes [BR:
pagh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
NIES204_36810 (nifJ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_10
Fer4_16
Fer4_21
Fer4
Fer4_6
TPP_enzyme_C
Fer4_2
Fer4_8
Fer4_9
Fer4_4
Fer4_17
Transketolase_C
Fer4_13
Fer4_22
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
BBD56354
LinkDB
All DBs
Position
complement(4088271..4091915)
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AA seq
1214 aa
AA seq
DB search
MNTKNYATLDGNEAVARVAYRLSEVIAIYPITPSSPMGEWADAWASVGDKNLWGTVPAVV
EMQSEGGAAGAVHGALQAGSLTTTFTASQGLMLMLPNLYKIAGELTCAVIQVAARSLAAQ
GLSIFGDHSDVMAARATGFALLCSASVQEAQDMALIAQASTLESRIPFIHFFDGFRTSHE
VQKIELLEDSDIRELIDDKYVYEHRNRALTPDRPVLRGTAQNPDVYFQGRETVNIFYDQT
PEIVQRAMDKLGQLTGRNYKLFEYHGAPDAERVIILMGSGCETVHETVDYLNAQGEKLGV
LKVRLYRPWDGEQLIAALPETVKAIAVLDRTKEPGSSGEPLYLDVVTAVQEVMLGDNDTL
KAKIKNLKALVGGRYGLSSKEFNPAMVKSVFENLAQTKPKNHFTIGINDDVSHTSLEYDP
SFSTEPDNVVRAMFYGLGADGTVGANKNSIKIIGEETDNYAQGYFVYDSKKSGAVTVSHL
RFGPQPIRSIYLISKANFIGCHQWTFIERLDVLQCAMEGSTFLLNSPYGPDQVWEYLPLE
IQEDIVRKNLKFYVIDANKVARDTGMGNRINTIMQVCFFALAKVLPREEAIAQIKKAIEK
TYGKKGAEIVRLNLKAVDETLEHLYEVNVAQANSALRRAEPVAVGAPTFVKEVEGMMIAG
RGDDLPVSKLPCDGTYPTGTSKWEKRNVAQDIPVWDADVCIQCGKCVMVCPHATIRGKAY
DEAALENAPASFKFTNVKDKAFTGEKFTIQVAPEDCTGCGICVDVCPAKNKSMPSRKAIN
MEPQLPLREQEATNWDFFLGIPNPDRLKLRPDLIRQQQWQEPLFEFSGACGGCGETPYIK
LVTQLFGDRMIVANATGCSSIYGGNLPTTPWTTNADGRGPAWSNSLFEDNAEFGLGFRMS
IDKHAGFALELLHKLGGEVGDNLVTQITDNAQKSEADIWEQRQRVVQLKEKLQGLNSPDA
QQLLSLADYLVKKSVWIIGGDGWAYDIGYGGLDHVIASGRNVNILVLDTEVYSNTGGQSS
KATPRGAVAKFAAGGKPSAKKDLGLIAMTYGNVYVASVAMGAKDEHTLKAFLEAEAYDGP
SIIIAYSHCIAHGINMTTAMTHQKDLVESGRWLLYRYNPDLKEAGKNPLILDSKSPKKTV
EASMYAENRFKMLTKSKPADAKRLLKEAQEDVSTRWKMYEYMAARPLETKGNNGHSEGKS
APISEGKPPETTPV
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaaaaaattatgcaaccctagatggtaacgaagccgttgctcgtgttgcttat
cgtttgagtgaagttatcgccatttatccgatcaccccgtcctcacccatgggagaatgg
gctgatgcttgggcctccgtgggggataaaaacctctgggggacggttccggccgtggta
gaaatgcaaagcgaaggcggggcggctggggccgtacacggggctttacaagcgggttcc
ctgacaaccaccttcaccgcatcccaagggttaatgttaatgctccccaacctctacaaa
atcgcgggagagttaacctgtgccgtgatccaagtggccgcccgttccttagccgcccaa
gggttatctattttcggcgaccatagtgatgtgatggcagctagggccacggggttcgcc
ctgttgtgttccgcctcggtgcaggaagcccaggatatggccttaattgcccaggcatcc
accctagaatcacgaattccttttattcacttttttgacggatttcgtacctcccatgaa
gtccaaaaaattgaactattagaggatagtgatatccgagaattaatcgatgataaatac
gtttatgaacatcgcaaccgcgctttaacacctgaccgtcctgtcctgcgaggaacggct
caaaaccccgatgtttatttccaaggccgagaaaccgttaatattttttatgatcaaacc
cccgaaattgtacaacgggcaatggataaattggggcagttgacgggacgcaattataaa
ctatttgaatatcacggtgcccccgatgccgaacgggtaattattctcatgggttccggt
tgtgaaaccgtccatgaaaccgtggattatttgaatgcccaaggggaaaaattaggggta
ttaaaagttcgattatatcgtccttgggatggggaacaattaattgcggcactgccggaa
actgtcaaagcgatcgcggttttagatcggacaaaagaacccggttctagtggggaaccc
ctctatttagatgtggtgacggccgttcaggaagtgatgttaggagataacgataccctt
aaagctaagattaaaaaccttaaagcattggtagggggacgttatgggttatcttctaaa
gaatttaatccggcaatggttaagagtgtttttgagaatttagcccaaactaaacccaaa
aatcactttactattggtattaatgatgatgttagccacacctccttagaatacgatccc
agcttctccaccgaacccgataacgtggtgcgggcgatgttctatgggttaggtgcagat
ggtaccgttggtgctaataaaaactcgattaaaattattggggaagaaaccgataattat
gcccaaggatattttgtttatgactccaaaaaatctggggctgttaccgtatctcacttg
cgttttgggccgcaaccgatccggtcgatttatttaattagtaaggcgaattttatcggt
tgccatcaatggacgtttatcgaaagattagacgttctccaatgtgcgatggaaggttca
actttcctcttaaatagtccctacggccccgatcaagtttgggaatatctgcccttagaa
attcaagaagatattgttagaaaaaatctgaaattctatgttattgatgccaataaagtt
gcccgtgatacggggatgggaaaccgcatcaatactattatgcaggtgtgtttctttgcc
ttagcgaaagtattgccaagggaagaagcgatcgcccaaatcaaaaaagcgatcgaaaaa
acctatggtaagaaaggagcagaaattgttcgcttaaacttaaaggccgttgatgagacc
ctagaacacctttatgaagtcaacgttgcccaggccaacagcgccctacggcgagccgaa
cccgtagccgtcggagcccctacctttgttaaagaagttgaaggcatgatgatcgccgga
cggggggatgatttgcccgttagcaaactgccctgtgatggtacttatcccaccggaacc
tctaaatgggaaaaacgcaacgtcgcccaggatatcccggtttgggatgcggatgtctgt
atccagtgtggcaaatgtgtgatggtttgtccccatgccacaattcggggtaaagcctac
gatgaggctgccctggaaaacgcccccgccagtttcaaatttaccaacgttaaggataaa
gcctttaccggagaaaaattcaccatccaagtcgctcccgaagactgtaccggatgtggc
atctgtgtggatgtttgcccggccaaaaataaatccatgccttcgagaaaagcgatcaac
atggaaccccagttacccctgcgggaacaagaagctacgaattgggactttttcttgggt
attcccaaccctgatcggttaaaattacggccagatttgatccgtcaacaacaatggcaa
gagccgttatttgagttctccggcgcctgtggtggatgtggcgaaactccctatatcaag
ttggttacgcagttatttggcgatcggatgatcgtggccaacgccaccggatgttcctct
atttatggcgggaacttacccacaaccccctggacaacaaacgccgacggtcgcggcccg
gcttggtctaatagcttatttgaagataacgccgaatttggtttagggttccgaatgtcc
attgacaaacacgctgggtttgctctggaattgttacacaaactcggcggtgaggttggg
gataatttagttacccaaattaccgataacgcccaaaaatccgaggccgatatttgggaa
caacggcaacgggttgtccaactcaaagaaaaacttcaaggactcaattcccctgacgcc
caacagttacttagtttggccgactatttagtgaaaaaatccgtttggattattggggga
gatggttgggcctatgatattggttacggtggcttagatcacgtcattgccagtggccgt
aacgttaatattttggttttggatacggaagtttattccaacaccgggggtcagtcttct
aaagctaccccccgcggcgccgttgctaagtttgcggctggtggtaaaccctcggctaag
aaagacctcggcctcattgccatgacctacggtaacgtttatgtggcgagtgtggcgatg
ggggccaaggatgaacacaccctgaaagcgttcttggaagcggaagcctacgacgggcca
tcaattattattgcctattcccactgtattgctcacgggattaatatgacaacggctatg
acccatcaaaaagatctggtggaaagtggccgttggttactgtatcggtataacccagac
ttgaaagaagcaggcaaaaacccgttaattttggattctaaatcacctaagaaaaccgtt
gaggcgtctatgtatgcggaaaaccgtttcaaaatgttgaccaagagcaaacctgctgat
gccaaacggttgttaaaagaagcccaagaagacgtcagtacccgttggaaaatgtatgaa
tatatggccgctcgtccattagaaactaagggtaataacggtcattctgaagggaaatca
gccccaatttcggaaggtaaacctccagaaactacacctgtataa
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