Planktothrix agardhii: NIES204_37630
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Entry
NIES204_37630 CDS
T05658
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagh03016
]
NIES204_37630
Enzymes [BR:
pagh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NIES204_37630
Transfer RNA biogenesis [BR:
pagh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NIES204_37630
Prokaryotic type
NIES204_37630
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBD56434
LinkDB
All DBs
Position
4167380..4168318
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AA seq
312 aa
AA seq
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MQITFLGTSSGVPTRSRNVSSIALRLPQRAEIWLFDCGEGTQHQFLRSDLKISQISRIFV
THLHGDHIFGLMGLLASCGLAGNPKRIDIYGPSGLSEYLQGCVRYSQTHFSYPVKVHTIE
PGIIFEDEEYQVVCGPLKHRVPAFGYRIIEKDKPGRFDVETAQKLGIPPGPIYAQLKQGQ
TVTLANGQIIRGKELCGEAQVGRKFVYCTDTVFCDGAVELAENADVLVHEATFSHQDAEM
AFQRLHSTSTMAAQVALAAGVKQLIMTHFSPRYAPGNSIILEDLLTEARSIFQNTDMAYD
FLTHEIPRRPSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcagattacatttttaggtactagctcgggggttcccacgcgatcgcgcaatgtttct
agcatagctttgcgtttaccgcaacgggctgaaatttggctatttgattgtggagagggg
acgcagcatcaattccttcgtagtgatttaaaaatcagtcaaattagtcgaatttttgtt
acccatctacacggcgatcatatttttgggttaatggggttattagctagttgtgggtta
gcgggaaatcccaaacggattgatatttatgggccatcgggattatctgaatatttacag
ggctgtgtgcgctattcccaaacccatttttcttatccggttaaagtccatactattgag
cccggaatcatttttgaagatgaggaatatcaagtggtttgtgggccgttaaaacatcga
gtcccagcctttggttatcgaattatagaaaaggataaacccggacgatttgacgtggaa
acagcccaaaaattagggattccccctgggccaatttatgctcaactgaaacagggacag
accgtaaccctggctaatggtcagataattcggggtaaggaattatgtggcgaagctcaa
gtaggtcgtaaattcgtctattgtaccgatacggtattttgtgatggggcggtagaatta
gcggaaaatgcagatgtattagttcatgaagccaccttctcccatcaagatgcagaaatg
gcttttcaaagattacattctacctcaacaatggcggcacaggtagcactagccgccgga
gtcaaacaattaattatgactcattttagcccccgttacgcccccggaaattcaattatt
ttagaggatttattaacagaagctagaagcatttttcaaaatacagacatggcttatgat
ttcctcacccatgaaattccccgtcgtccctccccgtag
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