Planktothrix agardhii: NIES204_38940
Help
Entry
NIES204_38940 CDS
T05658
Name
(GenBank) putative ABC transport substrate-binding protein
KO
K17244
putative chitobiose transport system substrate-binding protein
Organism
pagh
Planktothrix agardhii
Pathway
pagh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES204_38940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pagh02000
]
NIES204_38940
Transporters [BR:
pagh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative chitobiose transporter
NIES204_38940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
BBD56564
LinkDB
All DBs
Position
complement(4302040..4303347)
Genome browser
AA seq
435 aa
AA seq
DB search
MKQLKFWKRLGLLFVLGLFLSWGVSCSTSSPTSQNGKQEIEFWTMQLQPQFTDYFNQLIA
NFETENPGLKVKWVDIPWSAMESKVLAAVAAKTAADVINLNPDFAALLAGRNAWLNLNEM
VPETVQAQYLPNIWQANKIEVCPNDKCETVTFGIPWYLTTQITIYNQQLLQQAGINQPPK
TYTELAQVAEKVKEKTGKYAFFMSFVPEDSAQVLQSLVQMGVVLLDKNGKAAFNTPEGKA
AFEYWVSLYQKDLLPKEVLTQGHRRAIELYQAGEIALLASGPQFLKAISQNAPTVAQVSV
PAPQITGDKRKTTVAVMNLVMPRSTDVPEQSLKFALFVTNSTNQLAFAKAANVLPSIQEA
LKDSHFTTLPANSTVADQARLISAQELKNAQVLIPPKKDIKQLQKIIYDNLQAAMLNQKT
VDQAIADAEKSWNER
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattaaaattttggaaacggttgggtttgttattcgttttgggtttattttta
agctggggtgtcagttgctccacctcttccccaacctctcaaaacgggaagcaagaaatt
gaattttggacaatgcaactccaaccacaatttacggattattttaatcaactcattgcc
aattttgaaaccgaaaatccagggttaaaagtgaagtgggttgatattccttggtcggcg
atggaaagtaaagtattagctgcggttgcggctaaaactgccgccgatgtgattaactta
aatcctgattttgcggctttattagcaggacgaaatgcttggttaaatctcaatgaaatg
gttcctgaaacggttcaagctcaatatttacccaatatttggcaagcgaataaaatagaa
gtttgtccgaacgataaatgcgaaactgttacctttgggattccttggtatttaaccact
caaattactatttataaccaacaattactccaacaagcgggaataaatcaaccgcccaaa
acctatacagaattagcacaagtcgcagaaaaagtcaaggaaaaaacgggaaaatatgcg
tttttcatgtcttttgtgccggaagattctgcccaggttttacaatctttggtacagatg
ggtgtggtattactggataaaaatggcaaggcggcttttaatactcctgaaggtaaagct
gcttttgaatattgggttagtttatatcaaaaagatttacttcctaaagaggttttgacc
caaggacatcgccgagcaattgaattatatcaggcgggagaaatagctttattagcttcg
gggccacagtttttaaaagctattagtcaaaatgcccccacggtagctcaagtgtctgtt
cccgcgcctcaaattactggagataagaggaaaactacggtggcggtaatgaatttagtc
atgcccagatctacggatgttcctgaacaatctttaaagtttgctttgtttgtaactaat
agtacaaatcaactggcatttgcgaaagctgctaatgttttaccttcaattcaagaagct
cttaaagatagtcattttaccacccttcctgctaattcaaccgtggcagatcaagcccgt
ttaattagtgcacaagaactcaaaaatgctcaggttttgattccccctaaaaaagatatt
aaacagttgcaaaaaattatttatgataatctacaagctgcaatgttgaatcaaaaaact
gttgatcaagcgatcgcagatgcggaaaaaagttggaatgaaagataa
DBGET
integrated database retrieval system
