Planktothrix agardhii: NIES204_39030
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Entry
NIES204_39030 CDS
T05658
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagh03032
]
NIES204_39030
03036 Chromosome and associated proteins [BR:
pagh03036
]
NIES204_39030
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_39030
DNA replication proteins [BR:
pagh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NIES204_39030
Chromosome and associated proteins [BR:
pagh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NIES204_39030
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NIES204_39030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Transposase_mut
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BBD56573
LinkDB
All DBs
Position
4314755..4315060
Genome browser
AA seq
101 aa
AA seq
DB search
MNKGELVDAVAERASVTKKQADAVLTAALETIMEAVSNDDKVTLVGFGSFESRERKAREG
RNPKTGEKMEIPATKVPAFSSGKLFKEKVANTKAEPDSDED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtgaattagtggacgccgtagcagaacgggccagtgtgaccaaaaaacaa
gctgatgcggtgttaacggcagctttagaaaccatcatggaagcagtttccaatgatgac
aaagtgacactggttggctttggttcctttgagtcccgcgaacggaaagcccgtgagggt
cgtaacccgaaaactggggaaaaaatggaaattccagccaccaaagtcccggctttttca
tcgggtaaactattcaaggaaaaagtggctaataccaaagcagagccagacagtgatgag
gactaa
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