Planktothrix agardhii: NIES204_40480
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Entry
NIES204_40480 CDS
T05658
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pagh03110
]
NIES204_40480 (clpC)
Chaperones and folding catalysts [BR:
pagh03110
]
Heat shock proteins
HSP100
NIES204_40480 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
TniB
AAA_14
UVR
AAA_18
Mg_chelatase
IstB_IS21
AAA_28
Zeta_toxin
VapE-like_dom
TsaE
ATPase_2
AAA_3
AAA_23
NACHT
IBN_N
DNA_pol3_delta2
NBD_SMAX1
TIP49
Torsin
Bacteriocin_IId
PknH_C
Motif
Other DBs
NCBI-ProteinID:
BBD56715
LinkDB
All DBs
Position
4467039..4469516
Genome browser
AA seq
825 aa
AA seq
DB search
MFEYFSDKAIKAVMLAQEEARRLGHNFVGTEQILVGLMSEGTSVAAKTLKAQGLALREVQ
KEVEAIIGRGSGFLPVEIPFTPRAKRIFETAMKEARQMGNNYIGPEHILLGLLQDNEGVA
SKVLENLGVDRSQVRTEVIRSLGEEATVAPGGGSRSKSTKTATLDEFGTNLTQLAAEGKL
DPMIGRQREIERVIQILGRRTKNNPVLVGEPGVGKTAIAEGLAQRIVNNDVPDVLENKQV
ISLSMGTLIAGTRFRGEFEERLKTIVEEIRTAGNIILVIDEIHTIVGAGSIEGTMDASNM
LKPALARGELQCLGATTLDEYRKYIERDAALERRFQPVMVGEPTVEETVEILFGLRRAYE
QHHQLTISDQALYAAATLSDRYISDRFLPDKAIDLIDEAGSRVRVMNSKVPPELRELKRE
LTKVIGEKETAVKLQDFDQASELRDRELEIKDRLETPTEKTNIAGTGLVVTEDDIAEILA
AWTGINVNKLTESESVKLLKLEDILHERLIGQNEAVGAVSRAIRRARVGLKNPDRPIASF
IFSGPTGVGKTELTKALATYFFGAEEAMIRLDMSEYMERHTVSKLIGSPPGFVGYEEGGQ
LTEAVRRRPYTVVLFDEIEKAHPDVFNLLLQILEDGRLTDAKGRTVSFKNTLIIMTSNVG
SKVIEKGGGGLGFEWGAASEADQQYNRIKNLVHEELKQYFRPEFLNRLDEIIVFRQLEKS
EVKQIAEILLRDLLARLTERDITLTVSEGFKDHLVNVGFDPKYGARPLRRALMNLLEDAL
AEALLAGTIKDGDRAFIDVDQQGKVTISPGDHAPNSINEYAVTNS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatacttctcggataaggcaattaaggcggtgatgttagctcaggaagaagcc
cgacgcctgggacataactttgtaggaacagaacaaattcttgtgggcttgatgagtgaa
ggaaccagtgttgctgccaaaaccttgaaggcgcaagggttagccctccgtgaagtccaa
aaagaagttgaggcaattattggtcgtgggtcaggtttcctgcccgtggaaattcccttt
acccccagggccaaacgcatctttgaaaccgcgatgaaagaagcgcgacaaatgggcaat
aactatatcggccccgaacatatcttactcggattactccaagacaacgaaggagtggca
tcaaaagtcctagaaaatctgggggttgaccgttctcaagtgcggactgaggtaattcga
tccctgggagaagaagccaccgtcgccccggggggaggaagtcgcagcaagtccaccaaa
accgccaccctggacgaatttggcacaaacctcacccaactggccgccgaaggcaaactt
gacccgatgatcggtcgtcaacgggaaattgagcgggtaattcaaattctgggacgccgc
accaaaaataaccccgtgttggtgggtgaacccggcgtcggaaaaaccgccattgcggaa
ggcttagcccaacgcattgttaataacgatgttcccgatgtcctggaaaacaaacaagtg
atcagcttgagcatgggaactttaattgctggaactcgttttcggggggaatttgaagaa
cgcctaaaaaccattgtcgaagaaattcgtaccgccggaaatatcattttagtgattgat
gaaattcataccattgtgggtgcgggttccattgaagggactatggacgcctccaatatg
ctcaaacccgccctcgcccggggtgagttgcaatgcttaggggcgacgaccctggatgaa
taccgcaaatatattgaacgggatgcggccctggaacggcggttccaacccgtgatggtc
ggtgaacccacagtggaagaaaccgtggaaattctgttcgggctgcgtcgagcttatgaa
caacaccatcaattaacgatttccgatcaggcattatacgcggcggcgaccctatccgat
cgttatattagcgatcgctttttacccgataaagccattgatttaattgatgaagcgggt
tcgcgagttcgggtgatgaattccaaagttccccccgaattacgggaattaaaacgggaa
ttaactaaagttattggcgaaaaagaaacggcggtcaaactccaagatttcgatcaagct
agtgaactgcgcgatcgcgaattggaaatcaaagatagactggaaacccccactgaaaaa
accaatatagcgggtacgggtttagttgtaactgaagacgatattgccgaaattttagcg
gcttggacaggtattaatgtcaataaattaaccgaatcggaatcggtaaaattattgaaa
ttggaagatatcttacatgaacgtttaattggtcaaaatgaagcggttggcgccgtttct
cgtgctattcgtcgcgcccgggtgggattaaaaaatcccgatcgccccattgccagtttc
attttttctggccccacgggagtcggaaaaaccgaattaactaaagccctagccacctat
ttctttggggcagaagaagcgatgattcgcttagatatgtcggaatatatggaacgacat
acggtgtctaaattaatcggttctcccccaggatttgttggctatgaagaaggagggcaa
ttaactgaagctgtccgtcgtcgtccctatacggtggtgctatttgacgaaattgaaaaa
gcccatcccgatgtcttcaatttgttattacaaatcttagaagatggtcgtttaaccgac
gctaaaggtcgcacagtcagtttcaaaaataccttaattattatgacctcaaacgtgggt
tctaaggtaattgaaaaaggcggcggtggtttaggatttgaatggggtgctgcttctgaa
gcagatcagcaatataaccggattaaaaatttagtccatgaggaactcaagcaatatttc
cgaccggaatttcttaaccgtttggatgaaattattgtcttccgtcaattggaaaaatcc
gaagttaaacaaattgccgaaatcttactccgagatctgttagccaggttaacagaaagg
gatattactttaaccgttagtgaagggtttaaagatcatttagttaatgtgggttttgat
cctaaatatggggccagacccttacgtcgagccttaatgaatctgttagaagatgcctta
gctgaagccttattagctggaacaattaaggatggcgatcgggcatttattgatgtggat
caacagggaaaagtcacgatttcacccggagatcatgccccgaattctattaatgaatac
gccgttaccaattcctaa
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