Planktothrix agardhii: NIES204_41450
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Entry
NIES204_41450 CDS
T05658
Name
(GenBank) clpX gene product
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pagh
Planktothrix agardhii
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pagh03110
]
NIES204_41450
Chaperones and folding catalysts [BR:
pagh03110
]
Heat shock proteins
HSP100
NIES204_41450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
zf-C4_ClpX
AAA
ClpB_D2-small
AAA_5
Mg_chelatase
AAA_22
RuvB_N
AAA_14
Sigma54_activat
MCM
AAA_18
Sigma54_activ_2
IstB_IS21
ABC_tran
AAA_28
AAA_16
AAA_7
nSTAND3
RNA_helicase
Rad17
TsaE
DEAD
SKI
NACHT
B12-binding_2
PduV-EutP
AAA_23
AAA_33
T2SSE
AAA_24
AAA_19
AAA_PrkA
PhoH
AAA_15
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBD56810
LinkDB
All DBs
Position
4577622..4578971
Genome browser
AA seq
449 aa
AA seq
DB search
MSKYDSHLKCSFCGKSQEQVRKLIAGPGVYICDECVELCNEILDEELFDSSSATPPPTSP
RPQVPQAPQRRQRTGRVGLNQIPKPREIKSYLDSHVIGQDEAKKVLSVAVYNHYKRLGFL
QTKTTGRPAEDSNVELQKSNILLIGPTGCGKTLLAETLAKMLEVPFAVADATTLTEAGYV
GEDVENILLRLLQVADFDVEEAQRGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKM
LEGTIANVPPQGGRKHPYQDCIQIDTSNILFVCGGAFVGLDKLVEQRTGKKSMGFVQQGD
VQPKDKRTVDALKQMEPDDLVKFGLIPELIGRIPMIAVLEPLDEATLVAILTEPRNALVK
QYQKLLRMDNVQLEFDEDAIKAIAQEAYRRKTGARALRGIVEELMLDVMYEIPSRKDVKR
CRVTREMVEKRSTAELLLHPSSLPKPESA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtacgactcccatctaaaatgttctttctgtggtaagtcccaggagcaagtt
cgcaagctcattgcagggccaggtgtttatatctgtgatgaatgtgtggaactctgtaat
gaaattttagatgaggagttattcgacagcagttcggctacaccccccccaacgtccccc
cgtccccaagtcccccaagctccccaacggcgacaacggacgggacgagtgggtttaaat
caaattcctaaaccgagagaaattaaatcctatctcgactcccacgttattggccaagat
gaggcgaaaaaagttctctcggttgcggtttataaccattacaaacggttagggtttcta
caaacgaaaactaccggacgtccggctgaagatagtaatgttgagttacaaaaatctaat
attctattaattggccccaccggatgcgggaaaaccctattggcggaaaccttagctaaa
atgttagaggttccctttgctgttgctgatgccacaaccctcaccgaagctggttatgtg
ggggaagatgtggaaaatattttattgcggttattacaggttgccgattttgatgtggaa
gaagcgcaacggggaattgtttatattgatgaaattgataaaattgcccgcaaaagtgaa
aatccatctattaccagggatgtatcgggggaaggagtacaacaggctttattaaaaatg
ttagagggaaccattgctaatgtcccaccccagggcggacgcaaacatccctatcaagat
tgtattcaaattgataccagtaatattctatttgtctgtgggggggcctttgttggatta
gataaattggtggagcagaggacgggcaaaaagtccatgggatttgtccaacagggagat
gttcaaccgaaagataaacgcaccgttgatgccctcaaacagatggaacccgatgatttg
gtcaaatttggtctaattcctgaattgatcggtcggattccgatgatagcggtcttagaa
cccttagatgaagctaccttggtcgccattttaactgagccacgcaatgctttagtgaaa
caatatcaaaaactattgcggatggataatgtgcagttagaatttgatgaagatgcaatt
aaagcgatcgctcaagaagcctatcgtcgcaaaactggagcccgagcgttacggggaatt
gtggaggaattaatgttagatgtcatgtatgaaattccctctcgcaaagatgtcaaacgc
tgtcgggtgacgcgagaaatggtagaaaaacgctccacagcagaattattattacatcca
tcttccttacccaaacccgaatcagcataa
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