Planktothrix agardhii: NIES204_41460
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Entry
NIES204_41460 CDS
T05658
Name
(GenBank) hypothetical protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00520
Amino sugar and nucleotide sugar metabolism
pagh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
NIES204_41460
Enzymes [BR:
pagh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
NIES204_41460
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_39
Glyco_hydro_10
DUF4265
Motif
Other DBs
NCBI-ProteinID:
BBD56811
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Position
4579029..4580471
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AA seq
480 aa
AA seq
DB search
MTLNLLNSVHLKFKESQFKLKKLIPVFVGLLTLLSILGVGQFQVLGQQQNDITIDFGAQR
TGLSSVSGFLYGKNATQPPDSMIKPLEPKLWRTSQLDLYPRVIGLGAQFQLILSDTWGYG
SPRGWPYNNYAKWEEHVRQIARQHKDKVILWDVWNEPDLKEPFWKGTREQFFETYKRAYQ
VLRQELGPNVMIGGPSIAKYDQNFFTAFLNYCKANNLEVNFLSWHELNDQDITSITARIN
NARRSFQQNPDYQSLKIQKIYVNEIIGPTAQYRPAENLGFLYYTELGRPDGAARACWDPI
NKGSGTNNCFNNSLDGLVTPDLSLPRAVWWVYKAYTDGFNSRVASQSSNPKIVALASRAN
REGKAQILFGYFEQAFSAPTAGVTLILKNLPNSSGNSTFKVQKIPDSGEQVIKELVTVRQ
ENITVNNQQLVRLTIPNIQLHEAYILTIENSTNSPGISGRNPPTTTTNTSTSARIKWVDG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacattaaatctattaaattcggtgcatctaaaattcaaagaatctcaattcaaactg
aaaaaactgatccccgttttcgtgggtttactcacgttattaagtattttaggggtcgga
caatttcaagttttaggacaacaacaaaacgatattacgattgattttggagctcaaaga
actggcttgagttccgtaagtggctttttatatgggaaaaatgccacccaaccgccagat
agtatgattaagcccttagaacctaaactgtggcggacttcccaactggacttgtatccg
cgagtgattggactgggggcccaatttcaactgattttaagtgatacttggggctatggc
tcccccagaggatggccctataataattatgctaaatgggaagaacacgtccgacaaatc
gcccgccaacataaagataaagtcatattatgggatgtttggaacgaacccgacttaaaa
gaacccttttggaaaggaacaagagaacagttttttgaaacctataaacgagcctatcaa
gtattacgtcaagaattaggcccaaatgtgatgattggtggccctagtattgccaaatat
gatcaaaatttttttaccgcatttttaaattattgtaaagctaataatttagaagttaat
tttttgtcttggcatgaactcaatgatcaagatattacctcaattacggctcgaattaat
aatgctcgtcggagttttcaacaaaatcccgattaccaaagtttaaaaattcagaaaatt
tatgttaatgaaattatcggccctacggctcaatatcgtccggcggaaaatttaggcttt
ttgtattacaccgaattaggacggcccgatggtgcggctagagcctgttgggatccaatt
aataaaggcagtggaaccaataattgttttaataatagtttagatggtttagttaccccg
gatttatctttacccagagccgtctggtgggtttataaagcctacacagatgggtttaat
tcccgggttgcgagtcagtctagtaaccctaaaattgttgccttagctagtcgtgctaat
cgagaaggaaaggctcaaattctattcggttattttgaacaagccttttctgcgccgacg
gcgggagtcacattaattctgaaaaatttacctaattccagtggaaattcaaccttcaaa
gtccaaaaaattcccgattctggagaacaagtaatcaaggaattggtcacagtccgacag
gagaatattaccgtaaataatcaacagttagtccggttaacaattcctaatattcaactg
catgaagcctatattttaactatagaaaattcaacaaattcgccaggaatatcagggaga
aatccgccaacaacaacaacaaatacgtcaacttcagcaagaattaaatgggttgatggc
taa
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