Pseudaeromonas aegiceratis: ABHF91_04005
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Entry
ABHF91_04005 CDS
T10906
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pagi Pseudaeromonas aegiceratis
Brite
Transcription machinery [BR:
pagi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ABHF91_04005 (rapA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XLW41641
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Position
complement(799778..802654)
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AA seq
958 aa
AA seq
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MAFGLGQRWISDTETDLGLGTVVAVDGRMVTLLFPASGENRIYAKEDAPVTRVQFHAGDT
ITSHEEWMLKVETVEEQQGLLTYHGIRQDTGEAASLKEVFLSNFLKFNKPQDRLFAGQVE
RLSRFSLRYQALTHQHARRLSPTRGLAGGRVSLIPHQLHIAREVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLGGRAQRVLILVPETLQYQWLIEMRRRFNLHFALFDEERCVEAAHE
ADNPFDSEQLVICSLDWLRKKRARFDEVHDTQWDLLVVDEAHHLEWSESAPSRAYQIVEA
LAEEIPGVLLLTATPDQLGHESHFARLRLLDPERFYDYDAFLAEEQSYGQVADAAQALLS
GDALTADRQAVLSDCLGRAVPAQPDELSRQQLLGELLDRHGTGRILFRNTRASISGFPER
VLDAVGLPLPEQYKTAARVMGMMGGSTGDAEAQARRALYPEKIFAQFEGDDASWTRFDPR
VDWLLALLKAARHEKVLVICSEAATALTLENALRTREGIRGAVFHEGMSLLERDKAAAYF
AQTEGGAQVLLCSEIGSEGRNFQFACHLVLFDLPLNPDLLEQRIGRLDRIGQLNRVQIHV
PYLLGTPQALLLRWYHEGLGAFEQTCPTGRPVFEAVRDSLFALLATSQGDDDAALAALLA
TTREQHQALKAKLEQGRDRLLEIHSSGGQSAQALVDQLDEEDDDTSLVSFALQLFDDIGI
NQDDRGEDAIVLTPGDHMLVPSFPGLPAEGCTVTFERNTALSREDLTFLTWDHPMIRGGI
DLILSSEIGSNAVALLKNQSLPAGTTLLELIFVAESAVHPQLYRFLSPTPIRLLLDKSGN
DLAAKVSFEALSRQLTPINRHLASKLVGASQALIHGLIAQGETLAAPRVAEITAAAQARM
SQALDGELQRLQALQAVNPSVRASELQHLVELKDELTHQIQQTQLKLDAIRFVVITHQ
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcatttggtcttggccagcgttggattagtgataccgaaacggatctcggattgggt
actgtggttgctgtcgatggacgcatggtgaccctgctgtttcccgccagcggtgagaac
cgcatctatgccaaggaagacgcccccgtcacccgcgtgcagtttcacgccggcgatacc
atcaccagccacgaagagtggatgctgaaggtggaaacagtagaagaacagcagggcctg
ctgacctaccatggcatccgtcaggacaccggcgaagcagccagcctcaaagaggtgttc
ctcagcaacttcctcaagttcaacaagccacaggatcgcctgttcgccggtcaggtggag
cggctgtcgcgctttagcctgcgttatcaggccctcacccaccagcatgctcgccgcctg
agccccacccgcggcttggccggcggtcgggtcagcctgatcccccatcagctgcacatc
gcccgggaagtgggccagcgccatgcgccgcgggtactgctggccgacgaagtggggctg
ggtaagaccatcgaggccggcatgatcattcaccaacagctgctgggcggtcgcgcccag
cgggtgttgatcctggtgcccgagaccctgcaataccagtggctcatcgagatgcgtcgg
cgcttcaacctgcattttgccctgtttgatgaagagcgctgcgtcgaggccgcacacgaa
gccgacaaccccttcgacagtgaacagctggtgatctgcagcctggactggttgcgtaag
aagcgggctcgcttcgatgaggttcatgacacccagtgggatctactggtcgttgatgag
gcgcaccacctggagtggagtgaatcggcccccagccgcgcctatcagatcgtcgaagcc
ctggccgaggagatccccggcgtcctgctgctgaccgccaccccggatcagttgggccat
gagagtcactttgcccgccttcgcctgctggatcccgagcgcttctatgattacgacgcc
ttcctggccgaggagcagtcctacggccaggtggccgatgcggcccaggcgctgctcagt
ggcgacgccttgaccgctgaccgacaggcggtgctgagcgattgcctggggcgggcggtc
ccggctcagcccgatgaactcagccggcagcaactgctgggcgaactgctggatcgccac
ggtacgggtcgtatcctgttccgtaacacccgggcctccatcagtggcttccctgagcgg
gtgctggacgccgtgggcctgcccctgcccgagcaatacaagacagccgcgcgggtgatg
ggcatgatgggcggcagcaccggagacgccgaagcccaggcgcggcgcgccctctacccg
gagaagatcttcgcccagtttgagggggatgatgcctcctggacccgcttcgacccgcgg
gtggactggttgctggcgctgctcaaggccgcccgccatgagaaggtgctggtgatctgc
tcagaagccgccaccgccctgaccctggaaaacgccctgcgcacccgtgaaggcataagg
ggggccgtgttccatgagggcatgagcctgctggagcgggacaaggccgccgcctacttc
gcccagaccgagggcggcgcccaggtgttgctctgctccgagatcggctcagaagggcgc
aacttccagtttgcctgccacctggttctgttcgatctgccgctgaacccggatctgctg
gagcaacgcatcggccggctcgatcgtatcggccagctcaaccgggtacagatacatgta
ccctatttgctgggcaccccccaggccctgttgctgcgctggtatcacgaggggctcggt
gccttcgagcagacctgccccaccggccgccctgtgtttgaggcagtgcgggacagcctg
ttcgccctgctggccacaagccagggagacgatgacgccgccttggccgctctgctggcg
acgacccgcgagcagcatcaggccctcaaggccaagctggagcaaggccgggatcgcctg
ctggagatccactcctccggcggtcaatccgcccaggccctggtggaccagctggacgag
gaggacgatgacaccagcctggtgagcttcgccctgcagctgtttgatgacatcggcatc
aaccaggacgatcgcggtgaagacgccatcgtgctgaccccgggcgatcacatgctggtg
cccagcttccccggcctgcccgccgaaggctgcaccgtcaccttcgagcgcaacacggcg
ctgagccgggaagatctgaccttcctgacctgggatcaccccatgatccgcggcggcatc
gatctcattctctccagcgagatcggcagcaatgccgtggccctgttgaagaaccagagc
ctgcccgccggcaccaccttgctggagctgatcttcgtcgccgaatcggcggtgcatccc
cagctctatcgcttcctgtcccccacccccatccggctgctgctggacaaatcaggcaac
gatctggcggccaaggtgagcttcgaggccctgagccgtcagctcacccccatcaaccgc
catttggccagcaagctggtgggagcctcccaggcgttgatccacggcctcatcgcccag
ggcgagaccctggccgccccgcgggtggcggagatcactgccgccgcccaggcgcgcatg
agccaggcgctggacggcgagctgcagcggctgcaggccctgcaggcagtgaacccctcg
gtgcgagccagcgaattgcagcatctggtggagctcaaagacgaattgactcaccagatc
cagcagacccagcttaaactggacgccatccgttttgtggtgatcacccatcagtaa
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