Pseudaeromonas aegiceratis: ABHF91_06845
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Entry
ABHF91_06845 CDS
T10906
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pagi Pseudaeromonas aegiceratis
Brite
KEGG Orthology (KO) [BR:
pagi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagi03016
]
ABHF91_06845 (truB)
Enzymes [BR:
pagi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABHF91_06845 (truB)
Transfer RNA biogenesis [BR:
pagi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABHF91_06845 (truB)
Prokaryotic type
ABHF91_06845 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XLW42177
LinkDB
All DBs
Position
1450182..1451150
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AA seq
322 aa
AA seq
DB search
MSRRRRFKGRDVHGILLLNKPSGISSNDALQQVKRIYNAAKAGHTGALDPLATGMLPICL
GEATKFSQFLLDADKRYQVTAQLGVRTDTSDAEGEVISRRPVAVTAEQLAAVLPRFMGET
MQVPSMYSALKHNGRPLYEYAREGIEVEREARPITIYDLTLLHFSGDQLSLDVHCSKGTY
IRTLIDDLGELLGCGAHVTALHRSQVAGYPADRMLTLEQLETIFSRCKQAGSPPREQLDP
LLLPMDTAVAALPEVNMSAIVASYVNQGQAVQVPGVPLEGFVRMTVGEEREFIGVGEIDD
DGKVAPRRLVRIAGDDEEEEQA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacgacgtcgtttcaagggccgtgatgtgcacggcatactgctgttgaacaag
cccagcggcatcagctccaacgatgccctgcagcaggtcaagcgtatctataacgccgcc
aaggcgggtcataccggtgccttggatcccctggccaccggcatgttgcccatctgcctg
ggggaggccaccaagttttcccagttcctgctggatgcggacaagcgctaccaggtgact
gcccagctgggggtgcggaccgataccagcgacgccgagggcgaggtgatcagtcgccgt
ccggtggcggtgaccgccgagcagctcgccgccgtgttgccgcgtttcatgggggaaacc
atgcaggtgccctccatgtattccgccctcaagcacaatggccgaccgctgtacgagtat
gcgcgggaagggatcgaggtggaacgcgaggcgcgccccatcaccatctatgatctgacg
ctgctccacttcagcggtgatcagctgagcctggatgtgcactgctccaagggcacctac
attcgcaccctgatcgacgatctgggcgagctgctgggctgtggtgcccatgtgaccgcc
ctgcatcgcagccaggtcgccggctatccggcggatcgcatgctgaccctggagcagctg
gagaccatcttctcccgctgtaagcaggccggcagtccgccgcgggagcaactggatccc
ctgttgctgcccatggacaccgcggtggcggcgctgcccgaggtgaacatgtcggccatc
gtggccagctatgtcaatcagggccaggcggtacaggtgcctggcgtgcccctcgagggg
ttcgtgcgcatgacggtgggtgaggaacgcgagttcatcggggtcggcgagatcgacgac
gatggcaaggtggctccccgccggctggtgcgtatcgccggcgacgatgaggaagaagag
caggcctga
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integrated database retrieval system
