Pseudaeromonas aegiceratis: ABHF91_08100
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Entry
ABHF91_08100 CDS
T10906
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pagi Pseudaeromonas aegiceratis
Brite
KEGG Orthology (KO) [BR:
pagi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagi03032
]
ABHF91_08100
03036 Chromosome and associated proteins [BR:
pagi03036
]
ABHF91_08100
03400 DNA repair and recombination proteins [BR:
pagi03400
]
ABHF91_08100
DNA replication proteins [BR:
pagi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABHF91_08100
Chromosome and associated proteins [BR:
pagi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ABHF91_08100
DNA repair and recombination proteins [BR:
pagi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ABHF91_08100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Arteri_nsp7a
HU-CCDC81_euk_1
HVO_A0261_N
ACP_syn_III_C
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
XLW42420
LinkDB
All DBs
Position
1702073..1702345
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKISEDADLSKASAGRALDAFIEAVTESLKTGDQVSLVGFGTFVVRERASRTG
RNPQTGATIEIAAAKQPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaatctcaactgatcgacaaaatttccgaggatgcagatctgtctaaggcctct
gccggccgtgcgctggatgctttcatcgaggcggtaactgagtccctcaagactggcgat
caggtctctttggtcggttttggcacttttgtggtgcgtgagcgcgcctctcgcaccggc
cgcaatccgcagaccggcgccaccatcgaaatcgccgccgccaagcaacctgccttcaag
gccggcaaggcgctcaaggacgccgtcaactaa
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