Pseudaeromonas aegiceratis: ABHF91_09880
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Entry
ABHF91_09880 CDS
T10906
Name
(GenBank) H-NS family nucleoid-associated regulatory protein
KO
K03746
DNA-binding protein H-NS
Organism
pagi Pseudaeromonas aegiceratis
Brite
KEGG Orthology (KO) [BR:
pagi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pagi03036
]
ABHF91_09880
03400 DNA repair and recombination proteins [BR:
pagi03400
]
ABHF91_09880
Chromosome and associated proteins [BR:
pagi03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
ABHF91_09880
DNA repair and recombination proteins [BR:
pagi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABHF91_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
A1_Propeptide
DUF3037
Motif
Other DBs
NCBI-ProteinID:
XLW39538
LinkDB
All DBs
Position
2099992..2100402
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AA seq
136 aa
AA seq
DB search
MSDFLKVIMNIRSLRAAAREVSLEQLEEGLEKLAAIVEERREEEASNREAQEERKRKITQ
YMDMLRADGIDPTELKELMGDIEKPAGKRAPRPPKYRYTDEGGQEKTWTGQGRQPVTIRK
HIEAGGVLEDFLIEKN
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttttgaaagtaataatgaacattcgtagcctgcgcgctgcggcccgtgaa
gtatcgctggaacaactcgaagaagggttggaaaagctcgccgccatcgtggaagaacgt
cgcgaagaagaggccagcaaccgcgaggcccaagaagaacgcaagcgcaaaattacccaa
tacatggacatgctgcgcgccgacggcattgatccaaccgaactcaaagagctgatgggt
gacattgaaaagccggccggcaagcgtgcgccccgtccgcccaaatatcgctataccgac
gaaggcggccaagaaaaaacctggaccggccaaggccgtcagccggttaccattcgcaag
cacatcgaagccggcggtgtcctggaagattttctgatcgaaaagaattaa
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