Pseudaeromonas aegiceratis: ABHF91_10435
Help
Entry
ABHF91_10435 CDS
T10906
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pagi Pseudaeromonas aegiceratis
Brite
KEGG Orthology (KO) [BR:
pagi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagi03032
]
ABHF91_10435 (topA)
03400 DNA repair and recombination proteins [BR:
pagi03400
]
ABHF91_10435 (topA)
Enzymes [BR:
pagi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABHF91_10435 (topA)
DNA replication proteins [BR:
pagi03032
]
Prokaryotic type
DNA Topoisomerases
ABHF91_10435 (topA)
DNA repair and recombination proteins [BR:
pagi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABHF91_10435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
XLW39641
LinkDB
All DBs
Position
complement(2220643..2223261)
Genome browser
AA seq
872 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHVRDLPTSGGTAADKEGSKPATRRGKTT
ETDKQRKEYLALVNRMGIDPEHGWQARYQVLPGKEKVVSELKSLADKADTIYLATDLDRE
GEAIAWHLRELIGGDDARFKRVVFNEITKSAIQEAFSHPGELNLDRVNAQQSRRFLDRVV
GYMVSPLLWKKIARGLSAGRVQSVAVRLIVEKEREIKAFVPEEYWDINADLLTPRQDPLR
MEVTGYNGSAFAPKTQQQAQVACDALQGARYQVLSREDKPTGSKPSAPFITSTLQQAAST
RMGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQEALEAVRDYIGEQFGADYLPAEAIRY
GAKANAQEAHEAIRPSSVRLQAEQLDGMEADAVRLYDLIWRQFVACQMTPAQYDATVLTV
EAAGYQLKAKGRILRFAGWTKVLPPMGRKGEDIQLPQVAQGDVLKLQQLDPRQHFTKPPA
RFTEAALVKELEKRGIGRPSTYAAIISTIQDRGYVKVENRRFYAEKMGEIVTERLVESFE
ELMSYDFTAQMETSLDAIAQGQRDWKAQLDSFYAEFRGTLQQAEQDAQAGGMRSNQMILT
DIDCPDCGRKMGIRTATTGVFLGCSGYALPPKERCKKTINLVPGDEFIAADSEEGEVNAL
RAMRRCPKCGTAMDSYVVDETRKLHVCGNNPDCDGYELELGQFRLKGYEGPVIDCDRCGA
QMQLRTGRFGKYMACTNEACKNTRKILKNGEVAPPKEDPVPLPELKCSQSDAHFVLRDGA
AGLFLAASTFPKSRETRAPLVAELQRFAERLSPKHRYLADAPAQDPEGNPAVVRFSRKSK
EQYVMTEVNGKATGWTAHYQDGRWVQAQGKGK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatctctggtgattgttgagtcgccggccaaggccaagaccattaacaagtat
ctgggcaaggacttcgtggtgaagtccagcgttgggcatgtgcgagacctgcccaccagt
ggcggcacggccgccgacaaggagggcagcaagcccgcaacgcgtcgtggcaagacgacc
gagacggacaagcagcgcaaggagtacctggcgctcgtcaaccgcatgggcatagaccca
gagcatggctggcaggcccgctatcaggtgctgccgggcaaggagaaggtggtcagcgag
ctcaagagcctggcagacaaggccgacaccatctatctggcgaccgacttggaccgcgaa
ggggaagccatcgcctggcacctgcgggaactgatcggcggcgatgatgcccgcttcaag
cgggtggtgttcaacgaaatcaccaagagtgccatccaggaggccttctcccatccgggc
gagctgaacctggatcgggtcaacgcccagcagtctcgccgcttcctcgaccgggtggtg
ggctacatggtgtcgcccctgctgtggaagaagatcgcccgtggcctctccgccggccgg
gtgcagtcggtggcggtgcgcctcatcgtggagaaggagcgggagatcaaggccttcgtt
cccgaggagtactgggacatcaacgccgacctgctgaccccgcgccaggatcccctgcgc
atggaggtgaccggctacaacggcagcgccttcgctcccaagacccagcagcaggcgcag
gtcgcctgtgatgccctgcaaggcgcccgctatcaggtgctgagccgggaggacaagccc
accggtagcaagccgtcggccccctttatcacctccaccctgcagcaggcggccagcacc
cgcatgggctttggggtgaagaagaccatgatgctggcccagcgcctctacgaggcgggc
tacatcacctacatgcgtaccgactctaccaacctgagccaggaagccctggaggcggtg
cgggactatatcggtgaacagtttggtgccgactacctgccggccgaggccatccgctat
ggcgccaaggccaatgcccaggaggcgcacgaggccattcgtccctcgtccgtgcgtctg
caggccgagcagctcgatggcatggaggccgatgcggtccgcctgtatgacctcatctgg
cgccagtttgtcgcctgtcagatgaccccggctcagtatgacgccaccgtgctgacggtg
gaggccgccggttaccagctgaaggccaagggccgcatcctgcgctttgccggttggacc
aaggtgctgccgcccatgggccgcaagggggaggacatccagttgccccaggtggcccag
ggggatgtgctgaagctgcagcagctcgatccgcggcaacacttcaccaagccgcccgcc
cgcttcaccgaagcggccctggtgaaggagctggagaagcgcggcatcggccgcccctcc
acctacgccgccatcatctccaccatccaggaccggggttacgtcaaggtggagaaccgt
cgcttctacgccgagaagatgggggaaatcgtcaccgagcggctggtggagagcttcgag
gagctgatgagctacgacttcaccgcccagatggagaccagcctggatgccatcgctcag
ggacagcgtgactggaaggcccagctggatagcttctacgccgaattccgcggcaccctg
cagcaggccgagcaggacgcccaggccggcggcatgcgcagcaaccagatgatactcacc
gacatcgattgccccgactgcggccgcaagatgggcattcgcaccgccaccacaggggtg
ttcctcggctgttccggctatgccttgcctcccaaggagcgctgcaagaagaccatcaac
ctggtgcccggtgatgaatttatcgccgccgacagcgaagagggcgaggtgaatgccctg
cgggccatgcgccgctgccccaagtgcggcaccgccatggactcctatgtggtggacgag
acccgcaagctgcacgtctgcggcaacaacccggactgtgacggctatgagctggagctg
ggccagttccgtctgaagggctatgagggcccggtgatcgattgcgaccgctgtggtgcc
cagatgcagctgcgtaccggccgcttcggcaagtacatggcctgtaccaacgaggcgtgc
aagaacacccgcaagatcctgaaaaacggcgaggtggcgccgcccaaggaagatcccgtg
ccgctgcctgagctcaagtgcagccagtccgacgcccacttcgtgctgcgggatggcgcc
gccggcctgtttctggccgccagcaccttccccaaatcccgggagacccgcgcccccctg
gtggccgagctgcaacgcttcgccgagcggctttcgcccaagcaccgctacctggccgat
gcgccggcccaggatccggagggcaatccggcggtggtgcgctttagccgcaagagcaag
gagcagtacgtgatgaccgaggtgaacggcaaggccactggctggaccgcccactatcag
gatggccgttgggtgcaagcccaaggcaagggcaaataa
DBGET
integrated database retrieval system
