Pseudaeromonas aegiceratis: ABHF91_12315
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Entry
ABHF91_12315 CDS
T10906
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pagi Pseudaeromonas aegiceratis
Pathway
pagi03030
DNA replication
pagi03430
Mismatch repair
pagi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABHF91_12315 (dnaE)
03430 Mismatch repair
ABHF91_12315 (dnaE)
03440 Homologous recombination
ABHF91_12315 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagi03032
]
ABHF91_12315 (dnaE)
03400 DNA repair and recombination proteins [BR:
pagi03400
]
ABHF91_12315 (dnaE)
Enzymes [BR:
pagi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABHF91_12315 (dnaE)
DNA replication proteins [BR:
pagi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABHF91_12315 (dnaE)
DNA repair and recombination proteins [BR:
pagi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABHF91_12315 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XLW39980
LinkDB
All DBs
Position
complement(2617241..2620720)
Genome browser
AA seq
1159 aa
AA seq
DB search
MAEPRFIHLRVHSDFSMIDGLQKVKPLVARAAEFGMPAMALTDQMNQCGLVRFYGEAHGK
GMKPIVGADLWLQSPELGDELYRLTALAMDNDGQQNLVQLISRAYLRGHVQGRAVVDKAW
LAELSAGLILLSGGREGDVGRFLLKGNQAMVAQTLAFYQQHFANRYYLELIRTGRTDEES
YLHMAVKLAGEQGVPVVATNEVVFRDESDFEAHEIRVAIHDGYTLDDARRPKRYSRQQYL
RSVDEMVALFADLPEALANTVEIAKRCNVTVRLGEYFLPNFPTGDMSTEDFLVMKSREGL
EERLAFLFPDPAVRTEKRPEYDERLEVELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYSLKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDKVIEHVAD
MYGREAVSQIITFGSMAAKAAIRDVGRVLGHPYGFVDRISKLVPPDPGMTLDKAFEAEPK
LPELYNQDEEVKALIDMARRLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDGEGKNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIEWALGMINPRLAQEGREPVNIAAIPLDDPASFKTL
LGCETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGNEA
ISYPDATWQHESLKPILDPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTIIPPDVNTGRYRFTVNEQGHIVYGIGAVKG
VGEGPIEAILEARDAGGGFRDLFDFCNRVDIKRLNKRVMEKLVLAGALDRLGPHRAALMA
SLPEAMKAAEQKAKDQALGQNDLFGDLFADDAVVPPPVFAQVPEWPDKVWLDGERETLGL
YLTGHPINQYQAELRHYTSARLCDLHPTDRDKITTAAGLVIATRVMVTKRGTRMGIMTLD
DRSGRLDVTLFSEALERFEPLLEKDRILVVSGQVGFDDFSGGLKMSARDVMDIAEARARH
ARQLRLQLDNNQIDGRFFQRFMEIMEPHRAGVCPVQVCYRKPGVQAQLALGTQWRVTPTD
QLLDDLRGLLGKSAVELMF
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccacgtttcattcacctgcgggtgcattccgacttttccatgatcgatggc
ctgcagaaggtcaaacccctggtggcccgcgccgccgagtttggcatgccggccatggcc
ctgacggatcagatgaaccagtgcggcctggttcgcttctacggcgaggcccacggcaag
ggcatgaagcccatcgtcggcgccgatctctggctgcagagccccgagctgggggacgaa
ctctaccgcctcaccgccctggccatggacaacgacggtcagcagaacctggtgcagctc
atttcccgcgcctacctgcgcggccatgtccagggccgggccgtggtggacaaggcctgg
ctggcggagctctccgccggcctcatcctgctctccggcgggcgggagggggacgtgggc
cgcttcctgctcaagggcaaccaggccatggtggcccagaccctggccttctatcagcag
cattttgccaatcgctactatctggagctgatccgcaccgggcgcaccgacgaggagagc
tacctgcacatggcggtgaagctggccggcgagcagggggtgcccgtggtggccaccaac
gaggtggtgttccgcgacgagtcagacttcgaggcccacgagatccgggtggccatccac
gatggctacaccctggatgacgcccgtcgccccaagcgctacagccgccagcagtatctg
cgcagtgtcgacgagatggtggcgctgtttgccgacttgccggaggccctggccaacacg
gtggagatcgccaagcgctgcaacgtcactgtgcgcctgggtgaatacttcctgcccaac
ttccccaccggcgacatgtccaccgaagacttcctggtgatgaagtccagggaggggctg
gaggagcgtctggcattcctgttcccggatccggcggtgcggactgagaaacgtcccgaa
tacgatgagcgcctcgaggtggagctcaaggtgatcaaccagatgggcttccccggttac
ttcctcatcgtgatggagtttatccagtggtccaaggataacggcatcccggtgggacct
ggccggggctcgggggcgggctccctggtggcctactccctcaagatcaccgatctggat
ccgcttgaattcgacctgctgttcgaacgcttcctgaaccccgagcgggtctccatgccc
gacttcgacgtggacttctgcatggatcgccgggacaaggtgatcgagcatgtggcggac
atgtacggccgggaggcggtgtcccagatcatcacctttggctccatggcggccaaggcg
gccattcgcgacgtgggtcgggtgctgggccacccctacggcttcgtggatcgcatctcc
aagctggtgccgccggatccgggcatgaccctggacaaggccttcgaggccgagcccaag
ctgccggagctgtataaccaggacgaggaggtcaaggccctcatcgacatggcccgccgg
ctcgagggggtgacccgcaacgccggcaagcacgccggtggcgtggtcatagcccccacc
aagatcaccgacttcgcccccctgtactgcgacggcgaaggcaagaacccggtgacccag
ttcgacaagaacgacgtggaatacgcgggcctggtgaagttcgactttttggggctgcgg
accctcaccatcatcgagtgggccctggggatgatcaaccccaggctggcacaggagggt
agggagccggtgaatatcgccgccatcccgctggatgacccggcctccttcaagaccctg
ttgggctgtgagaccacggcggtgttccagctggaatcccgcggcatgaaggatctgatc
aagcgcctcaagcccgactgcttcgaagacatgatcgccctggtggccctgttccgtccg
gggcccctgcagtccggcatggtggacaacttcatcgaccgtaagcacggcaacgaagcc
atctcctatccggatgccacctggcagcacgagagcctgaagcccatcctggatcccacc
tacggcatcatcctctaccaggaacaggtgatgcagatcgcccaggtgctggcggggtat
acgctagggggcgccgacatgctgcgccgcgccatggggaagaagaagcccgaggagatg
gccaagcagcgggccggcttcgaggaaggggcggtgaagaacggcgtcgacggcgagctg
gcgatgaagatcttcgacctcgtggagaagttcgccggctacggcttcaacaagtcccac
tccgccgcctatgccctggtctcctatcagaccctgtggctcaagacccatttccccgcc
gagtttatggcggcggtgatgacggcggacatggacaacaccgacaagatagtgaccctg
gtggacgagtgtcagcgcatggggctcaccatcatacccccggatgtcaacaccgggcgc
taccgtttcaccgtcaatgaacagggccacatcgtctacggcataggtgcagtcaagggg
gtgggggaaggccccatcgaggcgattctcgaagcaagggatgccggcggtggcttccgg
gatctgttcgatttctgcaaccgggtggacatcaagcgcctcaacaagcgggtgatggag
aagctggtgctggccggtgctctggaccgcctggggccccacagagccgccctgatggcc
tccttgccggaagccatgaaggccgccgagcagaaggccaaggatcaggccctggggcag
aacgatctgttcggcgatctgttcgccgacgacgccgtggtgccgccgccggtgttcgcc
caggtgcccgagtggccggacaaggtctggctggatggggagcgggagaccttggggctt
tacctcacgggtcacccgatcaaccaataccaggcggagctcaggcactacacctcggcg
cggctgtgcgatctgcatcccacggaccgggacaagatcaccacggcggcgggtctggtg
atcgccactcgggtcatggtcaccaagcgtggtacccgcatggggataatgaccctggac
gatcgctccggtcggctggacgtgaccctgttctccgaggcgctggagcgcttcgaaccc
ttactggaaaaggaccgcatcctggtggtcagcggacaggtcggctttgacgacttctcc
ggtggccttaaaatgtcggcccgtgatgtcatggatatcgccgaggcccgggccagacat
gcccggcaactgcggctgcaactggataacaatcagatcgacggccgttttttccaacgt
tttatggaaataatggagccacaccgtgccggggtctgcccggttcaggtatgctatcgc
aaaccgggcgtccaggcgcaattggccctgggcacccagtggcgggtgacgccgaccgat
caactactggacgacctgcggggcttgctgggcaagtccgcggtcgagctcatgttttaa
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