Pseudaeromonas aegiceratis: ABHF91_13975
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Entry
ABHF91_13975 CDS
T10906
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pagi Pseudaeromonas aegiceratis
Brite
KEGG Orthology (KO) [BR:
pagi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagi03016
]
ABHF91_13975 (truD)
Enzymes [BR:
pagi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ABHF91_13975 (truD)
Transfer RNA biogenesis [BR:
pagi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABHF91_13975 (truD)
Prokaryotic type
ABHF91_13975 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
XLW42595
LinkDB
All DBs
Position
complement(2973906..2974943)
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AA seq
345 aa
AA seq
DB search
MIPKWHYLHGQPTQTARLKAEPADFQVVEDLGFEPDGTGEHLMVRIRKTGENTAWVAKLL
AQAADVPRNAITWAGLKDRHAVTEQWFGIHLPGKPDPDLSVIENEQIQILTQARHSRKMR
VGALKGNHFQLLLRDLNTSDALEARLQAIAAQGVPNYFGSQRFGRQGNNLEGAQSMFEGR
RIKDRDKRSLFLSAARSYLFNLVVSARLEAGLAQRLLPGDCLMLAGSHSFFAEEEASAAL
AERLAQGDLQLSAPLWGRGRSPALAEALAFETQALDGQASWQAGLEAAGLKQERRALLLQ
PKGLQWQWLPEGLQLNFWLPAGTYATSLVRELVQVQAEQDEDTAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaagtggcactatctgcatggccaaccgacgcagaccgctcgcctcaaggcc
gaaccggcggatttccaggtagttgaggatctgggttttgagcccgatggcaccggcgag
cacctgatggtgcggatccgcaagaccggagaaaacaccgcctgggtggccaagctgctg
gcccaggcggcggatgtaccccgtaacgccatcacctgggccggacttaaggatcgccac
gcggtcaccgagcagtggtttggcatccatctgccgggcaagccggatccggatctgtcg
gtcatcgagaatgagcagatccagatcctcacccaggcccgccactcccgcaagatgcgg
gtgggggcgctgaagggcaatcacttccagctgttgctgcgggatctgaataccagcgat
gccctggaagcgcggctgcaggccatcgccgcccagggggtgcccaactatttcggctcc
cagcgtttcggccgccagggcaacaacctggagggggcccagtccatgtttgaggggcgg
cgcatcaaggatagggacaagcgctcactcttcttgtccgccgcccgcagctacctgttc
aacctggtggtcagcgcccggctggaagccggcctggcccagcgcctgctgcccggcgat
tgcctgatgctggcggggagccactccttcttcgccgaagaggaagccagcgcggccctg
gccgagcggttggcacaaggcgatctgcagctgagcgcgcccctgtggggccgagggcgc
agtccggcactggcggaggcgttggcctttgagacccaggccctggatggacaggcgagc
tggcaggcggggctggaggccgcgggtctcaagcaggagcgccgggccctcctgctgcaa
cccaagggattgcagtggcagtggttgcccgagggcttgcagctgaacttctggctgccg
gcgggcacctatgccactagcctggtgcgtgaactggtacaggtacaggcagagcaagat
gaagatactgctgagtaa
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