Pseudaeromonas aegiceratis: ABHF91_16545
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Entry
ABHF91_16545 CDS
T10906
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pagi Pseudaeromonas aegiceratis
Pathway
pagi03420
Nucleotide excision repair
pagi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pagi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABHF91_16545 (uvrD)
03430 Mismatch repair
ABHF91_16545 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagi03400
]
ABHF91_16545 (uvrD)
Enzymes [BR:
pagi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABHF91_16545 (uvrD)
DNA repair and recombination proteins [BR:
pagi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABHF91_16545 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ABHF91_16545 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XLW40764
LinkDB
All DBs
Position
complement(3542515..3544707)
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AA seq
730 aa
AA seq
DB search
MEIETLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLLGVERASPYSILAV
TFTNKAAAEMRGRIEALLGSDPGSQHRGLWMGTFHGIAHRLLRAHHLDANLPADFQILDS
DDQLRLIKRVIRGQNLDEKQWLPRSVAGFINGKKDDGLRPRDIDTLGDPVAKTYLRLYQI
YQETCDRAGLVDFAELLLRAHELWLHKPHILQHYQQRFAHILVDEFQDTNAIQYAWIRLL
AGDRNHVMIVGDDDQSIYGWRGAKVENISRFLSDFQGARTIRLEQNYRSTATILSAANLL
IANNAERLGKELWTDGAEGEPISIYAAFNELDEARFVVGRLKAWKDEGGTLDECAILYRN
NAQSRVLEEALMQERLAYRIYGGLRFFERQEIKDAMAYLRLLGNRGDDASFERVVNTPTR
GIGERTLGLIREAARDQGLNLWQAAIALCERKVLAGRAASAVSQFINLVNLLERDTDELP
LHVQIDRVVRQSGLWGLYEAEKSEKGQSRIENLEELVNAARTFSPDEAMADLPPLTAFVA
HAALEAGESQADEFEPAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQISAEESGRLEEER
RLCYVGMTRAMRKLYMTHAESRRLYGKEMYHRPSRFLKELPSECLEEVRLRTQVSWAQPV
AEQSRFNPRLTQESFNDTGLRLGQRVRHAKFGEGVVLNYEGSGPQCRVQVNFDEAGSKWL
VASYARLEAL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaaaccctgctggacggcctcaacgacaagcagcgggaggcggtggcggcc
ccgcttgagaacctgctggtgctggcaggggcgggctcgggcaagacccgggtgctggtg
caccgcatcgcctggctgctgggggtcgagcgcgcctccccttactccatcctggcggtg
accttcaccaacaaggcggcggccgagatgcgcgggcggattgaagccctgctaggcagc
gacccgggcagccagcaccgcggcctgtggatgggcaccttccacggcatcgcccaccgc
ctgctgcgcgcccaccatctggacgccaacctgccggcggacttccagatcctcgacagt
gacgatcagctgcggctcatcaagcgggtgatccgtggccagaacctggacgagaagcag
tggctgccccgctcggtggcgggcttcatcaacggcaagaaggacgacggcctgcgtccc
cgggatatcgacaccctgggggatccggtggccaagacctatctgcggctctaccagatc
taccaggagacctgcgatcgcgccggcctcgtggacttcgccgagctgctgctgcgggcc
cacgagctgtggctgcacaagccgcatatcctgcagcactaccagcagcgcttcgcccat
atcctggtggacgagttccaggacaccaacgccatccagtacgcctggatccgcctgctg
gccggggatcgcaaccacgtgatgatcgtcggtgacgatgaccagtccatctacggctgg
cgcggcgccaaggtggagaacatcagccgcttcctgagcgactttcagggcgcccgcacc
atccgcctggagcagaactaccgcagcaccgccaccatcttgagcgccgccaacctgctc
atcgccaacaacgccgagcggctgggcaaggagctgtggaccgacggcgccgagggcgag
cccatctccatctacgccgccttcaacgagctggacgaggcccgcttcgtggtggggcgc
ctcaaggcctggaaggacgagggcggcaccctggacgagtgcgccatcctgtatcgcaac
aacgcccagtcccgggtgctggaagaggccctgatgcaggagcggctggcctaccgcatc
tacggcggcctgcgcttcttcgagcgccaggagatcaaggacgccatggcctacctgcgc
ctgctgggcaaccggggggacgacgcctcgtttgagcgggtggtgaacaccccgacccgg
ggcataggcgagcgcaccctgggcctcatccgcgaggcggcccgggatcagggcctcaac
ctctggcaggccgccatcgcgctgtgcgagcgcaaggtgctggccggtcgcgccgccagc
gcggtgagccagttcatcaacctggtcaacctgctggagcgggacacagacgagctgccg
ctgcacgtgcagatcgaccgggtggtgcgccagtccggcctgtggggcctgtacgaggcg
gagaagagcgagaagggccagtcccgcatcgagaacctcgaagaattggtcaacgccgcc
cgcaccttcagcccagacgaggccatggcggatctgccgcccttgaccgccttcgtcgcc
catgccgcattggaggcgggggaatcccaggccgacgagtttgagccggcggtgcagctg
atgacgctgcacagcgccaaggggctggagttccccctggtgttcatggtgggggtggag
gagggcatgttccccagccagatctccgccgaagagagcggccggctggaggaggagcgg
cgcctgtgttacgtgggcatgacccgcgccatgcgcaagctctacatgacccacgccgag
agccgccgcctgtacggcaaggagatgtaccacagacccagccgcttcctaaaagagctg
cccagcgagtgcctggaggaggtgcggctgcgcacccaggtgagctgggcccagccggtg
gcggagcagagccgcttcaacccgcggctgacccaggagagcttcaacgacaccggcctg
cgcctggggcagcgggtgcgccatgccaagttcggtgaaggggtggtgctcaactacgaa
ggcagcggcccccagtgccgggtgcaggtgaacttcgacgaggcggggagcaagtggttg
gtggccagctatgcgaggttggaggcgctgtag
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