Paenarthrobacter sp. GOM3: IRJ34_00035
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Entry
IRJ34_00035 CDS
T10366
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pago Paenarthrobacter sp. GOM3
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pago03032
]
IRJ34_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
pago03400
]
IRJ34_00035 (gyrA)
Enzymes [BR:
pago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IRJ34_00035 (gyrA)
DNA replication proteins [BR:
pago03032
]
Prokaryotic type
DNA Topoisomerases
IRJ34_00035 (gyrA)
DNA repair and recombination proteins [BR:
pago03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IRJ34_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
WOH18760
LinkDB
All DBs
Position
8279..10948
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AA seq
889 aa
AA seq
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MSDETPEVPASNDAEDVVLEGDVLTDRVEQVDLQTEMQRSYLDYAMAVIVGRALPDVRDG
LKPVHRRVLYAMFDGGYRPDRSFNKCARVVGDVMGTYHPHGDMAIYDALVRLIQDWTMRY
PLALGQGNFGSPGNDGAAAPRYTETKMAQLAMEMVRDIDEETVDFQDNYDGKNQEPTILP
ARFPNLLVNGSSGIAVGMATNIPPHNLREVAEGVQWALDNPTATREELLEALLLRIKGPD
FPTGATILGHKGIEDAYRTGRGSITMRAVVNVEELQGRTCLVVTELPYQANPDNLAIKIA
ELVKDGKIQGIADLRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQDNFSANMLAI
VDGVPRTLSLDAFIRHWVAHQMDVIARRTRYRLRKAEEEAHILRALLKALDMLDEVIALI
RASNTTEAAREGLMELLEIDELQARAILDMQLRRLAALERQKIQDRHSELEAMIQEYNSI
LASEERQRQIISEELAEIVAKHGDDRRTHILMGFDGDMSMEDLIPEEEMVVTITRGGYVK
RTRSDNYRSQQRGGKGIKGAQLRGDDVVEHFFVTTTHHWLLFFTNLGRVYRAKAYELAEA
GRDAKGQHVANLLAFQPDEHIAQVLDLRDYQQAPYLVLATKNGLVKKTRLEDYDTNRTAG
VIAINLRDEDELVSAQLVSETDDLLLVSRKGQSIRFTATDDALRPMGRATSGVTGMKFRE
DDELLAADVVQDGSFVFIVTEGGYAKRTAVDEYRLQGRGGLGIKVAKLAEDRGDLVGALI
VQEEDEVLVVMEGGKVVRSAVTGVPAKGRDTMGVIFAKPDKNDRIIEVARNSERGLEVEE
SEDGLDDDVTLAEDDGAAEATVTPETENDADPETETGAELNEDNTGGNE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgaaactcccgaagtcccggcctctaacgacgccgaggacgttgttcttgag
ggtgatgtgctgaccgaccgcgtggaacaggtggacctgcagacggaaatgcagcggtcc
tacttggactacgcaatggccgttattgtcggccgcgccctccctgacgtacgggacggt
ctcaagccggttcaccgtcgcgtcctgtacgcgatgttcgacggcggttaccgcccggac
cgctctttcaacaagtgcgcccgcgtggtcggcgatgtcatgggtacctaccacccgcac
ggtgacatggcgatctacgacgctttggtccgcctcatccaagactggaccatgcgctac
ccgctggcacttggccagggcaacttcggttcgcccggtaacgacggcgccgctgcgccc
cgttacaccgaaaccaagatggcccagctggccatggaaatggtccgggacatcgacgag
gaaaccgtcgacttccaggacaactacgacggcaaaaaccaggaacccaccatcctgccg
gcccggttccccaacctgctggtcaacggttcctcaggcatcgccgtcggcatggccacc
aacattccgccgcataacctccgcgaagtcgccgaaggtgtccagtgggcgctggataac
cccacggccacccgggaagagctccttgaagcactgttgctccgtatcaagggacccgat
ttcccgacgggtgccacgatcctcggccacaagggcatcgaagacgcctaccggaccggc
cgcggctccatcaccatgcgcgcagtggtcaatgtggaggaactccagggccgcacctgc
ctggtagttactgagcttccctaccaggccaacccggacaacctggccatcaagattgcc
gaactggtcaaggacggcaagatccagggcatcgccgacctccgcgacgaaacctcgggc
cgtacgggccaacgcctggtgatcgtgctcaagcgcgacgcagtggccaaggttgtcctc
aacaacctgtacaagcacacacagctgcaggacaacttctcggccaacatgctggcaatc
gtcgacggcgttccgcgcaccttgagcctggatgccttcatccggcactgggttgcgcac
cagatggacgtcattgcccgtcgcaccaggtaccgcctgcgtaaggccgaggaagaagca
cacattctgcgcgcactcctcaaggcactggacatgttggatgaggtcatcgccctcatc
cgcgcgtcgaacaccactgaggcggcccgcgagggtcttatggagcttctggagatcgac
gaactccaggcccgcgccatcctggacatgcagttgcgccgtttggctgccttggaacgc
cagaaaatccaggaccgtcattcagagctcgaggcgatgatccaggaatacaactcgatc
ctggcttccgaggaacgccagcgccagatcatcagcgaggaactggccgagatcgtggcc
aagcacggcgacgatcgccgcacgcacatcctgatgggcttcgacggcgacatgtccatg
gaggacctgatccccgaagaggaaatggtcgtcacgatcacgcgcggcggatacgtcaag
cgcacccggagcgacaattaccgctcgcagcaacgcggcggcaagggaatcaagggtgcg
cagctgcgcggcgacgacgtcgtggagcacttctttgtgaccaccacgcaccactggctg
ctgttcttcaccaacctgggacgcgtctaccgcgccaaggcctacgagcttgcggaagct
ggccgggatgccaagggccagcacgtggccaacctcctagccttccagccggacgagcac
attgcgcaggtcttggatctgcgtgactaccagcaggcaccatacctggtgctcgcaacc
aagaatggcctggtcaagaagacaaggctggaggactacgacaccaaccgcacggccggt
gtcatcgccatcaacctccgtgacgaagacgaactcgtctctgcccagctggtcagcgaa
accgacgaccttctcctcgtgtcacgcaagggccaatcgatccgcttcacagcaacagat
gacgctttgcgccccatgggacgggcaacatccggtgtgaccggtatgaagttccgtgaa
gacgacgaacttttggccgctgatgtggtccaggacggctcgttcgtgttcattgtgacc
gagggcggctacgccaagcgcaccgccgtcgacgaataccggctccagggccgtggtggt
ctgggcatcaaggttgccaagcttgccgaagaccgtggggaccttgtgggcgcgttgatc
gtgcaggaagaagacgaagtcctggtggtcatggaaggcggaaaggtggtccggtcagct
gtcaccggagtccctgcaaagggccgcgacaccatgggcgtcatttttgccaagcctgac
aagaatgaccggatcatcgaagtagcacgcaacagcgaacgtggtttggaagtcgaagaa
tctgaggacggactcgacgatgacgtaacgttggctgaagacgacggcgccgctgaggcg
accgtcacgcccgaaacggaaaacgacgcagacccggaaaccgaaacgggcgcggagctg
aacgaagacaataccggaggtaacgagtga
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