Paenarthrobacter sp. GOM3: IRJ34_00470
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Entry
IRJ34_00470 CDS
T10366
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pago Paenarthrobacter sp. GOM3
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pago03021
]
IRJ34_00470
Transcription machinery [BR:
pago03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IRJ34_00470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
HTH_38
HTH_1
HTH_23
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WOH18836
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Position
94533..95306
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AA seq
257 aa
AA seq
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MRQTRPFDVSTRPPAAPEGSIRQSFQDSLVLDHLNLAKSIAARYSAHTHDLDDVRQVAYM
GLIKASRGYDESKGVSFPAYAAPTIAGEVKRYLRDHCWVVRPPRTIQDVRRQVLARTEEM
TQVLQRTPSPEEVAEDLRLEPCQVREALMAGTSKRPDSLDAPASEGREGLQGSLSAFGCP
TDRLEDVLALRNAIRGLSAEDRHLLYRRYYREETQSTIAEALGMSQMQVSRKLSKILVSL
QTRLLDDEAQLQDGTAP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaacccgacctttcgacgtcagtaccaggcctccggctgcacctgaaggaagc
atccgccaaagctttcaggacagcctggtcctggaccacctcaatctggccaaatccatt
gcggccaggtattccgcccatacccacgacctggacgatgtcaggcaggtcgcgtacatg
ggcctcatcaaggcctcacgcggctatgacgagtccaagggcgtcagttttcctgcctat
gctgcccccaccattgccggtgaggtcaagcggtacctccgtgaccattgctgggttgtc
cggccgccccgcaccatccaggacgttcggcgccaggtgctggcccggacggaggaaatg
acccaggtgctgcaacggaccccctccccggaggaagtcgcagaagacctccggctggaa
ccctgccaagtgcgtgaagcgctgatggcgggcaccagcaagcgcccggattccctggac
gctcccgcatcagaggggcgtgaaggcttgcagggttccctgtccgcttttggctgcccc
actgaccgcttggaggacgtgctggctctccggaacgccattcgggggctgagcgcggag
gaccgccatctgctgtacaggcgctactaccgcgaggagacgcagtccacgatcgccgag
gccctgggaatgtcccagatgcaggtttcacgcaagctttccaagatcctcgtctcgctc
caaaccagactgctggacgacgaagcccagcttcaggacggaaccgccccttag
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