Paenarthrobacter sp. GOM3: IRJ34_03285
Help
Entry
IRJ34_03285 CDS
T10366
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
pago Paenarthrobacter sp. GOM3
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pago03000
]
IRJ34_03285
Transcription factors [BR:
pago03000
]
Prokaryotic type
Helix-turn-helix
XRE family
IRJ34_03285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
Peptidase_M78
HTH_26
HVO_2718
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WOH19364
LinkDB
All DBs
Position
655368..656882
Genome browser
AA seq
504 aa
AA seq
DB search
MHFFAYSQEMSPVSWNREVVSPSSSPAAPELDVISLGRRVRHLRKQAGLTLDDLSAAVGT
APSQLSLIENGKREPKLGLLQQLAASLNVSIDQLLGAEPPSRRAALEIELERYQRGPLYE
SLNLPKIRISSRLPLEVLESQVGLLQELERKLNEQAATPEEARRANGELRAMMRERGNYF
PEYEAEAQKVLKGVGYTTGPLSQHVIADIAENLGFTLHHVGDLPHSTRSVTDLKNRRIYL
TQNQRQDHDPRSVLLQALGHYVLGHETPRNYGDFLAQRVATNYFAAALLLPEHATVEFLQ
KAKAAKEIAVEDIRDAFAVSYETAAHRFTNLATKHLGITTHFQKTHQSGIIYKAYENDGV
TFPQDHTGAIEGQPSCKAWTSRAVFDVPDKFSAYSQYTDTPSGTYWCTARTERSAAGEFS
LSIGVPYQHVKWFRGRETTARATSNCPDPNCCKRPPESLANEWAGNAWPSARAHSHLLAA
MPPGAFPGVDETEVYSFLAAHSER
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcttcgcgtattctcaagaaatgtcgcctgtgagctggaatcgcgaagtagtg
tcgccgtcgtcgtcccctgccgccccggaactggacgtcatcagccttgggcgccgcgtg
cgccatctgcgcaagcaggccgggctgacgttggacgacctcagtgccgccgtcgggacc
gcaccaagccagttgagtctgatcgaaaacggcaagcgcgagcccaaattgggactgctg
cagcagctggctgcgtcactcaatgtgagcatcgaccagttgctcggggcggagccgccg
agccgtcgcgctgccttggaaattgagctcgaacggtaccagcgcggacccctgtacgag
tcgctgaatctcccgaaaatccgcatcagttcgcggcttccactggaagtcctggagtcc
caggtggggctgcttcaggagcttgaacgcaaacttaatgagcaagccgcgacgccggag
gaagcccgccgcgcgaatggcgagttgcgtgccatgatgcgcgagcgcggtaactatttc
cccgagtatgaggcggaagcgcagaaggtcctcaaaggggtcggttacaccaccggtccg
ctgagccagcatgtcattgcggacatcgccgagaacctcggtttcacgctgcaccacgtg
ggcgacctgccgcattccacgcgttccgtgaccgatttgaagaaccgcagaatttatctc
acgcagaaccagcggcaagaccacgatccacgatctgttctgctccaggccctggggcat
tacgttttggggcacgagactccacggaactacggggattttttggcacagcgcgtggcg
accaactacttcgccgccgcgcttctgctgccggagcacgcaacggtggagttcttgcag
aaggccaaggctgcgaaggaaattgcggtggaagacatccgcgatgcgtttgcggtgtcg
tatgagacggccgcgcaccgcttcactaacctcgccaccaagcacctcggcatcaccacg
cacttccagaaaacccaccagtccgggatcatctacaaggcttacgagaacgacggcgtg
accttcccgcaggaccataccggggccatcgaggggcagccgtcgtgcaaggcatggacc
tcgcgggcggtgttcgacgtgccggacaaattcagcgcttacagccagtacacggacact
ccctcgggcacttactggtgcacggcgcggactgagcgctcggctgccggtgagttctcg
ctgagcatcggcgtcccgtaccagcatgtgaagtggttccgtgggcgggaaaccacggcc
cgcgcaacatccaactgcccggacccgaactgctgcaaacgtccgccggagtcactggcg
aacgagtgggccggcaacgcctggccctccgcccgggcacactcccacctgctcgcggcc
atgcctcccggagcgttccccggcgtggacgaaaccgaggtgtactccttcctggcggcg
cactccgaacgctaa
DBGET
integrated database retrieval system
