Paenarthrobacter sp. GOM3: IRJ34_04680
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Entry
IRJ34_04680 CDS
T10366
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pago Paenarthrobacter sp. GOM3
Pathway
pago00260
Glycine, serine and threonine metabolism
pago00630
Glyoxylate and dicarboxylate metabolism
pago00670
One carbon pool by folate
pago00785
Lipoic acid metabolism
pago01100
Metabolic pathways
pago01110
Biosynthesis of secondary metabolites
pago01200
Carbon metabolism
Module
pago_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IRJ34_04680 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IRJ34_04680 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IRJ34_04680 (gcvP)
00670 One carbon pool by folate
IRJ34_04680 (gcvP)
Enzymes [BR:
pago01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
IRJ34_04680 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WOH19622
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Position
970297..973143
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AA seq
948 aa
AA seq
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MTVSSASTTFVDRHIGARRQADIETMLKSVGYDTVDSLVDTAVPNDIRQDVALTLQNALS
EVEVLAELRKLASKNKTAVQMIGQGYYDTVTPPVIRRNILESPAWYTAYTPYQPEISQGR
LEALLNFQTMVQDLVGLPIANASLLDEATAVAEAVLMMRRANKNKAAQDGKTVLDADCLP
QTIAIVKGRAEALGFEVEVADLSAGLPEGAINGVVLQQPGVSGRVFDHSAVIAEAKERGA
LVTVAADLLSLTLITPPGEQGADIAVGSAQRLGVPLFFGGPHAAYMAVQKGLERSMPGRL
VGVSKDDAGVPAYRLALQTREQHIRREKATSNICTAQALLAIVASMYAVYHGPEGLKAIA
ETAHGHARTLAASLKAAGVEVLHGSFFDTITVRVPGKAAEVVAAAEARGINLRGVDADTV
GISVDETTTSEIVGRVLDVFGASVLEDAEGFALEASVERTSDFMQHPVFNTHRSETQLLR
YIRKLSDRDLALDRTMIPLGSCTMKLNATAEMEAISWPEFASIHPFAPDSQTEGWRELIT
DLEAQLTEITGYDQVSIQPNAGSQGELAGLLAIRGYHLSNGDDQRNVCLIPASAHGTNAA
SAVLAGMKVVVVATAPDGTIDHVDLKAKIEANRDVLSAIMITYPSTHGVYDADVREVCDA
IHEAGGQVYIDGANLNALVGLAQPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPVAAKAHL
APFMPGDAASWTEGNDVPISASRFGSAGVLPISWAYVKLMGGQGLTEATKSALLAANYIA
SRLNDHFPVLYTGEGGLVAHECILDLRELTAKTGVTAEDVAKRLIDFGFHAPTLAFPVAG
TLMVEPTESEDLVEIDRFIEAMITIRKEIDQVAAGDFSVQDSPLRRAPHTAAAVVSSDWD
RSYPREQAAFPVHHLKQDKYFPPVGRIDGAAGDRNLVCSCPPIEDFEN
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtgacggttagttctgcctccaccaccttcgtcgatcggcatatcggcgcccgccgccag
gccgacattgagaccatgctcaagtctgtcggctacgacaccgttgattcgttggtcgac
accgccgttcccaacgatatccgccaggacgtcgccctcaccctgcagaacgcgctgagc
gaagtcgaagtcctggctgagctgcgcaagctcgcctcgaagaacaagactgccgtccag
atgatcgggcagggctactacgacaccgtcacgccgcctgtcatccgccgcaacatcctt
gagtccccggcctggtacacggcctacaccccgtaccagccggaaatctcgcagggccgc
ctcgaagcactgctcaacttccagaccatggtccaggacctggtgggcctgcccatcgcc
aacgcctccctcctggacgaagcaacggccgtggccgaggccgtcctgatgatgcgccgc
gccaacaagaacaaggctgcccaggacggcaagactgtgcttgacgcagattgcctgccg
cagaccatcgcgatcgtgaagggccgtgccgaggcactgggtttcgaggttgaggttgcc
gatctcagcgccggcctcccggaaggtgccatcaacggcgtcgtcctccagcagccgggc
gtttccggtcgcgtgttcgaccactccgccgtcattgccgaggccaaggagcgcggtgcg
ctggtcaccgtcgcggccgacctcctgtccctgacgctcatcacccctcccggtgagcag
ggcgccgatattgctgttggttccgcgcagcgcctgggcgtgccgctgttcttcggcggc
ccgcacgccgcttacatggcggtccagaagggtctggagcgttccatgcccggccgcctg
gtaggcgtttccaaggacgacgccggtgtccccgcctaccgcttggcgctgcagacccgc
gagcagcacatccgccgcgagaaggccacgtccaacatctgtaccgcacaggcgctgctg
gccatcgtggcctcgatgtacgccgtctaccacggacctgagggcctgaaggcgatcgcg
gagaccgcacacggacacgcccgcaccttggccgcatccctgaaagctgccggcgtcgag
gtcctccacggctcgttcttcgacaccatcacggtccgcgttcccggcaaggcagctgaa
gttgttgcagccgccgaggcgcgcggtattaacctgcgcggcgtcgacgcggacacggtt
ggcatttctgtcgatgaaaccactacttccgagattgtcggtcgtgtcctcgatgtcttc
ggcgcttcggtacttgaggacgctgagggcttcgcgcttgaagcttcagttgagcgcact
agcgacttcatgcagcacccggtgttcaacacccaccgctcggaaacccagctcctgcgt
tacatccgcaagctctccgaccgggacctcgcactggaccgcaccatgatcccgctgggt
tcgtgcaccatgaagctgaacgccacggcagagatggaagccatttcctggccggagttc
gcctccatccacccgttcgcgccggactcccagaccgaaggctggcgtgagctgatcacc
gacctcgaggcgcaactgaccgagatcaccggctacgaccaggtctccatccagcccaac
gccggttcccagggtgagctcgccgggctcctcgcgatccgcggctaccacctctccaac
ggcgatgaccagcgcaacgtctgcctgatcccggcctccgcccacggcaccaacgccgcg
tcggcagtgctcgccggcatgaaggtagtggttgtggccaccgcgcccgatggcaccatc
gaccacgtcgacctcaaggccaagatcgaggccaacagggacgtcctctctgccatcatg
atcacctacccgtccacgcacggtgtctacgacgccgacgtccgggaagtctgcgacgcg
atccacgaggccggcggccaggtgtacatcgacggcgccaacctcaacgcgctggttggc
ttggcccagcctggcaagttcggcggcgacgtctcccacctgaacctgcacaagaccttc
tgcatcccgcacggcggtggcggacccggcgttggaccggttgcggccaaggcacacctg
gcacccttcatgcccggcgatgccgcgtcctggaccgaaggcaacgacgtcccgatttcc
gcgtcccgctttggatccgccggcgtcctgccgatctcctgggcttacgtgaagctcatg
ggcggccagggcctcaccgaagccaccaagtcagccctgcttgctgcgaactacatcgca
tcgcgcctcaacgaccacttcccggtgctctacaccggcgaaggcggacttgttgcccac
gagtgcatcctggacctccgcgaactgacggccaagaccggtgtgacggctgaagacgta
gccaagcgcctcatcgacttcggcttccacgctcccaccctggccttcccggtggcgggc
acgctgatggtggaacccaccgaatccgaagacctcgtggagatcgatcgcttcatcgaa
gccatgatcaccatccgcaaggaaatcgaccaggttgctgccggtgacttctccgtgcag
gattccccgcttcgccgcgcgccgcacacggcagccgccgtcgtgagttccgattgggac
cgttcgtacccgcgtgagcaggccgccttcccggtccaccacctgaagcaggacaagtac
ttcccgcccgtgggccgcatcgacggcgcagccggagaccgcaacctggtctgctcctgc
ccgcccatcgaagacttcgagaactaa
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