Paenarthrobacter sp. GOM3: IRJ34_07830
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Entry
IRJ34_07830 CDS
T10366
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pago Paenarthrobacter sp. GOM3
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pago03016
]
IRJ34_07830 (truB)
Enzymes [BR:
pago01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IRJ34_07830 (truB)
Transfer RNA biogenesis [BR:
pago03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IRJ34_07830 (truB)
Prokaryotic type
IRJ34_07830 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WOH20223
LinkDB
All DBs
Position
1662300..1663223
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AA seq
307 aa
AA seq
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MLSGLVIVDKPQGWTSHDVVGRMRRLAGTRKVGHAGTLDPMATGVLVLGINKATRLLTYI
VGTSKTYTATIRLGETTITDDAEGDVTEARSAADVTDEAIAAGVATLTGPIQQVPSSVSA
IKVNGERSYARVRSGEEVKLAARPVTIHRFDVHAINRLDGGRVVDVDVTVECSSGTYIRA
LARDLGNDLGVGGHLTALRRTQVGPYTLEQARTLEELAEELNVLDMSLAARSLMPNRELT
EDETTEISFGRRIAAGPGAGTAEAATAENPAAAFAPSGELVALLADTGSFAKPVLVFAPG
TGSGEAK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgctttctggactggtaatcgttgacaaaccgcagggatggaccagccacgatgtggtt
ggccggatgcggcggctggctggtacccggaaagtggggcatgcggggacgctcgatccc
atggccaccggcgtcctggtgctcggcatcaataaggcgacgcgcctgctgacttacatc
gtggggacctccaagacctatacagccaccatcaggctcggcgaaaccaccatcacggac
gacgccgagggcgacgtcacggaggcccgcagcgccgcggacgtcaccgatgaagccata
gcggccggggttgccacgctcacgggccctatccagcaggtgcccagcagcgtgagtgca
atcaaggtcaacggcgaacgctcctacgcacgggtccgctccggtgaagaagtgaagctc
gcagcgcgccccgtgacgatccaccgcttcgacgtgcacgccatcaacaggctcgacggc
ggcagggtagttgacgtggacgtcaccgtggaatgttcttcaggaacttacattcgggcg
ctggcccgggaccttggaaacgacctgggcgtcggcggccacctcacggccctgcgccgg
acccaggtgggtccctataccctcgagcaggccaggaccctggaggaactggcggaagag
ctcaacgtcctggacatgtcccttgctgcccggtccctcatgccaaaccgtgagctcacc
gaggacgaaacaacggagatctcgttcggccgccggattgcggccgggccgggagcaggc
accgccgaggctgccacggccgaaaaccccgcagcagccttcgcgccctcgggggaactc
gtggcattgctggctgacaccgggagctttgccaagcccgtgttggtgttcgccccggga
accggttcaggggaggcgaagtag
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