Paenarthrobacter sp. GOM3: IRJ34_10995
Help
Entry
IRJ34_10995 CDS
T10366
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
pago Paenarthrobacter sp. GOM3
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pago03051
]
IRJ34_10995 (pafA)
Enzymes [BR:
pago01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
IRJ34_10995 (pafA)
Proteasome [BR:
pago03051
]
Prokaryotic proteasome
Bacterial regulatory particles
IRJ34_10995 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
WOH16902
LinkDB
All DBs
Position
2362017..2363381
Genome browser
AA seq
454 aa
AA seq
DB search
MDKRIFGIETEFGISYSSPDSRPLAPEEVARYLFRKVVSWGRSSNVFLTNGSRLYLDVGS
HPEYATAECDDLAQLIAHDRAGELILDDLVDEAQARLAAEGFNGTVYLFKNNTDSAGNSY
GSHENYLIPRRGEFSRLAEILIPFLVTRQLIAGAGKVLKTPHGATFAFSQRADHIWEGVS
SATTRSRPIINTRDEPHADAEFYRRLHVIVGDSNMSETSALLKVGTVDLILRMIEAGVIM
RDMRMENPIRSIREISHDLTGRALVRLANGRQLTALDIQREYLTKVTDFVTSNGAHNAHV
PLILDLWKRTLDAIESGDTSTIDTEVDWAIKKKLMDGYMRRHNLSLDSPRIAQLDLTYHD
ISRQRGLFFLLQARGAARRLVTETDVKDAVDAPPQTTRAKLRGDFVRRAQELGRDYTVDW
VHLKLNDRAHQTILCKDPFRSVDERVDALLDSMS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcgaatatttggcattgaaacggagtttggaatctcctattccagcccggat
tcgcgcccgctggcaccggaagaagtggcccggtaccttttccgcaaggtggtcagctgg
ggcaggtcatccaatgtgttcctgaccaatggctcccgcctctacctggacgtcggttcg
caccctgaatatgccacggccgaatgcgacgacctcgcccagctcattgcccatgacagg
gccggcgaacttatcctggacgacctcgtggacgaagcccaggcgaggcttgcggcggag
ggtttcaacggaacggtctatctcttcaagaacaacaccgattccgcaggtaactcctac
ggcagccacgaaaactacctcatcccacggcgtggggagttctcccgcctggctgagatc
ctcattccgttcctggtgacccggcagttgatcgcgggggcgggcaaggtcctgaagacc
ccgcacggtgccacgttcgcgttctcccagcgcgccgaccacatctgggaaggcgtgtct
tcggccaccacccgctcgcgtcctatcatcaacacccgtgacgaaccgcacgcagatgcc
gagttctaccgccgccttcacgtgatcgtgggcgactccaatatgtcggagacttccgca
ctgctcaaagtgggaaccgtggacctcatcctccgcatgatcgaggccggagtcatcatg
cgtgacatgcggatggagaatcccatccgcagcatcagggaaatatcgcatgacctgacc
ggacgtgcgctggtaaggcttgccaacggcaggcaactgacagctctcgacatccagcgc
gagtacctgacgaaggtcaccgacttcgtcaccagcaacggggcgcacaacgcccacgta
ccgctgatcctggatctgtggaagcggacgttggatgcgatcgaaagcggcgacaccagc
accatcgacaccgaagttgactgggccatcaagaagaagctcatggacggctatatgcgc
cggcataacctcagcctcgactcgccccgcatcgcccagctcgacctcacgtatcacgac
atctcgcggcagcgcggcctcttcttcctgctgcaggcccgtggggcagcacgccgcctg
gtgaccgagacggacgtgaaggacgccgtggacgcgcctccccagaccacacgcgccaag
ttgcgtggcgacttcgtccggagggcccaggagctcggccgtgactacaccgtggactgg
gtgcacctgaagctcaatgaccgcgcacaccagacgatcctctgcaaggacccgttccgc
agcgtcgacgaacgggtggatgccctcctggactctatgagctga
DBGET
integrated database retrieval system
