Paenarthrobacter sp. GOM3: IRJ34_11325
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Entry
IRJ34_11325 CDS
T10366
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pago Paenarthrobacter sp. GOM3
Pathway
pago03030
DNA replication
pago03430
Mismatch repair
pago03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IRJ34_11325 (holA)
03430 Mismatch repair
IRJ34_11325 (holA)
03440 Homologous recombination
IRJ34_11325 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pago03032
]
IRJ34_11325 (holA)
03400 DNA repair and recombination proteins [BR:
pago03400
]
IRJ34_11325 (holA)
Enzymes [BR:
pago01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IRJ34_11325 (holA)
DNA replication proteins [BR:
pago03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IRJ34_11325 (holA)
DNA repair and recombination proteins [BR:
pago03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IRJ34_11325 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WOH16967
LinkDB
All DBs
Position
complement(2430916..2431932)
Genome browser
AA seq
338 aa
AA seq
DB search
MAAAQNNRAKTAAANNVSWREVTPASVVLVTGPEEYLGIRAMDRIRSHVRTATPDVELSR
LNAGSYEAGSLAMTVTPSLFGEGKLIEIEGLEAMNDAFLADGLAYLRNPDQDVVLVLRHG
GGVRGKKLLDAVKSAGWPVVDCQPLKKDADKTAFVVSEFKAGGRRIEGEAVQALVNAVGA
NLSELAAACSQLIADATTAVDAATVERYYGGRVEATAFKVADAAMAGNGPVALSTLRHAL
ATGVDPVPLVAALAAKLRTLAKVAGANGSPATIARNLGMQPWLVEQAQRDVRRWTPEGLI
RSIQVIAEADAQVKGLSRDPVYAVEHAVTVIATSASRR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctgcccaaaacaaccgggccaaaaccgccgcggccaacaacgtcagctggcgt
gaggtaactccggcgtccgtggttttggtcacgggccccgaggagtatctgggcattcgt
gccatggaccgcatccggtcccacgtgcggacggctacgccggacgtggagttaagccgg
ctcaacgctggctcctatgaggctggttcgttggcaatgaccgttaccccgtcattgttc
ggtgaaggcaagctcattgaaattgagggcctggaagcgatgaacgacgccttcctcgcc
gatggcctggcatacctgcgcaacccggaccaggacgtcgtgctggtcctcaggcatggg
ggcggcgttcgtggcaagaaactgctcgacgccgtcaagtcggctgggtggccagtggtg
gactgccagccactcaaaaaggatgccgacaagaccgcctttgtggtctccgaattcaag
gccgggggccggcgcatcgagggcgaagctgtccaggccttggtcaacgcagtgggcgcc
aacctttccgaactcgccgcagcctgcagccagctgattgccgatgccaccactgccgtg
gatgcagcaactgttgagcgatattacggcggaagggtggaagccactgccttcaaggtt
gcagacgcggccatggccggaaatggtcccgtggcattgtcaacgcttcggcacgccttg
gctacaggagtggatcctgttcccttggtggcagccctcgcggcaaagttgcgtaccttg
gccaaggtggccggtgccaatggctctccggccaccatcgccaggaatttgggaatgcag
ccctggctcgtggagcaggctcaacgggatgtccgacgatggacccctgagggtctcatc
cggtctattcaggtcatcgcggaagcggacgcacaggtcaaagggctgtcccgtgacccc
gtgtacgccgtggaacacgcagtgacggtgatcgccacgtcggccagtcgacgctga
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