Paenarthrobacter sp. GOM3: IRJ34_11630
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Entry
IRJ34_11630 CDS
T10366
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pago Paenarthrobacter sp. GOM3
Pathway
pago00750
Vitamin B6 metabolism
pago01100
Metabolic pathways
pago01240
Biosynthesis of cofactors
Module
pago_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
IRJ34_11630 (pdxS)
Enzymes [BR:
pago01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
IRJ34_11630 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
IMPDH
NMO
Glu_synthase
TetR_C_27
DHO_dh
TMP-TENI
Trp_syntA
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
WOH17025
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Position
complement(2502273..2503199)
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AA seq
308 aa
AA seq
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MSTPDVSNEAGSSANSVTGSSRVKRGMAEMLKGGVIMDVVNVEQARIAEDAGAVAVMALE
RVPADIRAQGGVSRMSDPDMIDQIIAAVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEV
LTPADYVNHIDKWNFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATGHMRK
IRAEIAKLAALPEDELYVAAKELQAPYELVKEIAATGKLPVVLFTAGGIATPADAAMMMQ
LGADGVFVGSGIFKSGNPAERAAAVVKATTFYDDPDVIAKVSRGLGEAMVGINVDEIPQP
HRLAERGW
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacaccagatgtaagcaacgaagccggttcgtccgcgaacagcgtcacgggcagc
agccgcgtcaagcggggcatggctgagatgctcaagggcggcgtcatcatggacgtcgtt
aacgtcgagcaggcccgcatcgccgaggacgccggcgccgttgccgtcatggccctcgag
cgtgtcccggccgacatccgcgcccagggtggcgtgtcccgcatgtccgatccggacatg
atcgatcagatcatcgccgccgtgtccatcccggtgatggccaaggcccgcatcggccac
ttcgtcgaagcccaggtcctgcagtccctcggtgttgactacatcgacgagtccgaggtc
ctgaccccggccgactacgtcaaccacatcgacaagtggaacttcaccgtcccgttcgtg
tgtggtgccaccaaccttggcgaggcgctgcgccgcatcaacgagggcgcggccatgatc
cgttccaagggcgaagccggtaccggcgatgtttccaacgcgaccggtcacatgcgcaag
atccgtgccgagatcgccaagctcgccgccctccccgaggacgagctgtacgtcgcggcc
aaggaactgcaggccccgtacgaactggtcaaggaaatcgccgcgaccggcaagctcccg
gtagtgctgttcaccgccggtggcatcgcgactccggctgatgctgcaatgatgatgcag
ctcggcgccgacggcgtgttcgttggttccggtatcttcaagtctggcaacccggcagag
cgcgcggccgccgtcgtcaaagccaccaccttctacgacgaccccgatgtcatcgccaag
gtctcccgtggcctgggcgaagcgatggtcggcatcaacgtcgacgaaattccgcagccc
caccgcctcgcagagcgcggctggtaa
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