Paenarthrobacter sp. GOM3: IRJ34_12665
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Entry
IRJ34_12665 CDS
T10366
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pago Paenarthrobacter sp. GOM3
Pathway
pago02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IRJ34_12665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pago02000
]
IRJ34_12665
Transporters [BR:
pago02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IRJ34_12665
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF3877
DUF3558
Motif
Other DBs
NCBI-ProteinID:
WOH17207
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All DBs
Position
2718484..2720148
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AA seq
554 aa
AA seq
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MASSKRRRLTVQFGAVVVALGLAACTGTTGPSPSSPGSTATAEPTATFNFGTSSMPLGLD
PALTSDSESYRITRQVLEGLVGVDGETGQTTPLLATEWKDSNNGLSYDFTLRSQVTFHDG
TPLDATAVCANFDRWFSFSPELRKQAPGISFQSVFKAHSDAPVFSIFKDCKVVSASNVQI
NLTRPFTGFLKALTLPAFAISSPAALAAQKANVLDQVRNGEAISTYASHPVGTGPYEFSA
WDDKQVTLASYKNYWGNRGQIATINFIPYDRAETRQQALLDGKIDAYDLVTSGTFDQLVK
KGVQIIQRDPFSVMYLGINQAVAPLDKPEIRQAIEMAIDKESLIRKFFIDNTTQASQFVP
PKLSGFNNNAPSLGYNPDKAKELLSKAGYKGEELKFYYPLNATRAYMPTPEKIYAEISRQ
LVAVGFNIKPVPVDWEDGYLQKVQSPGDRALHLLGWNGSYADADNFLGPLFGETRAEFGY
SDSDVFHKIERARAMPDGDERNAQYQAINADIAASVPAVPIAFPISALALSDKVESYPAS
PVLNEVFTNVRLKP
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagcagcaaaaggcggcgcctgaccgtacagttcggagccgtggttgtggccttg
gggctggcggcatgtactggaacaacaggcccctcgccttcttcccctggcagcaccgcc
accgctgagccgacggcaactttcaatttcggaacatcctccatgcccttgggcctcgat
ccggcattgacgtcggactccgagtcctaccgcatcacccgccaggtcctcgaaggcctc
gtgggcgtcgacggcgaaaccgggcagactaccccgcttctggcgacggaatggaaagac
agcaacaacggcctcagctacgatttcacactccgctcccaggtcacgttccatgacgga
accccgctggatgccaccgctgtctgcgccaacttcgaccgctggttctcgttctcccct
gaactccggaagcaggccccgggtatctccttccagagtgtttttaaggcccattcggac
gccccggtcttctccatcttcaaggactgcaaggtagtttcggccagcaacgtccagatc
aacctgacgcggcccttcactgggttcctgaaggcactcacgttgccggccttcgcgatc
tcctcccccgcagctttggcagcgcaaaaagcaaacgtcctggaccaggtccgcaacggc
gaggcgatctccacctacgcaagccacccggtaggaaccggaccttatgaattcagcgcc
tgggacgacaagcaagtcaccctggcgagctacaagaactactggggaaaccgcggccag
atagccaccattaacttcatcccttacgaccgcgccgagacacgccagcaggccttgctg
gacgggaaaatcgacgcctacgacctcgtgacttccggaaccttcgaccaattggtcaag
aagggtgtccagatcatccagagggaccccttctccgtgatgtacctcggcatcaaccag
gccgttgcgcccctggacaagcccgagatccgccaggccatcgagatggccatcgacaag
gagtcgctgatccggaagttcttcatcgacaacaccacgcaggcgtcacagttcgtgccg
ccgaagctcagcggcttcaacaacaatgccccctcgctggggtacaacccggacaaagcc
aaggagctcttgtccaaggcaggctacaaaggcgaagagctgaagttctactatccgctg
aacgccaccagggcctacatgccgacgccggagaagatctacgcggaaatcagccgtcag
ctggtagccgtgggcttcaacatcaagcctgtgcccgtggactgggaggatggctatctc
cagaaggtgcagtcacccggggaccgggccctgcacctgctcggctggaacggctcctac
gccgatgccgacaacttccttggtccgttgttcggggaaacccgcgcagagttcgggtac
tcggattcggatgtcttccacaagatcgagcgggcacgtgcaatgcccgacggcgatgag
cgcaacgcgcagtaccaggccatcaacgcggacatcgctgcttcggtaccggccgtcccc
atcgctttccccatctcggcactggctttgtccgacaaggtggaaagctaccccgcctcc
cccgtgctgaacgaagttttcacgaacgtccgcctaaagccttga
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