Paenarthrobacter sp. GOM3: IRJ34_12820
Help
Entry
IRJ34_12820 CDS
T10366
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pago Paenarthrobacter sp. GOM3
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pago03400
]
IRJ34_12820
DNA repair and recombination proteins [BR:
pago03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IRJ34_12820
Archaeal homologous recombinant proteins
IRJ34_12820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_15
SoDot-IcmSS
LidA_Long_CC
Motif
Other DBs
NCBI-ProteinID:
WOH17238
LinkDB
All DBs
Position
complement(2752605..2755661)
Genome browser
AA seq
1018 aa
AA seq
DB search
MRIHRLDIEAFGPFATPQHIDFDQLSSQGLFLLNGATGAGKTSILDAICFALYGSVPGAR
QEGKRLRSDHAAPGAEPRVVCEFTARGRRFEVSRSPAWERPSARGRNGYTTQQAKTLLRE
RVGGSWEEKSSRNDEVGAELSDVLGMDRDQFTRVVMLPQGDFAAFLRSKASDRLDLLQKL
FGTQRFEAVERQLAQQAAAAAKEVGENASGLQVLLDRVASEQAQLGVSGATGEEASVERA
GPAFTAGDAPRADNEDPEAWLATVEEEVQAEWKRREAAASEAESQSARYAEEFQEAEEKS
LRHARLAAALQRRILAELAAPRALENREALAKHRRAAVLSGQLDAVDSAARKVDSAVERV
AKARGKLAAAGVDADDPTAALDAAKASHAVLQARLPDEQRMEEIAGRLAAKRTEETTHQA
AAAKATSLLDQLREEAATLDSRMEPLEPLAVHLADRERDASSAAELVGIVARYSTAASEL
DTLTGKHLQARSDSQDLRQHWLDVRELRLANAAGELAMALESGKPCAVCGSEDHPKPAAA
ARSALSLAQDEEEARQRFESSEQALADLAGHVSAAAQVVAGLAAQGGSLDMAEADAKLVS
AESAALEARKATTLLAELRGEREALSQRMAQVQEAHSASVGAAAQAASAVLLLQEQRDAL
EAELAGLRGDFPSLRERLEALSRERTLLQEAADGDQELEGARQVMVEATAALERALPESG
FGSAEEARRELLSPADVVGLEQDLADFDAETAKLDELFASEDLVLAAKEASIGELPLPES
ERAEARLRASKAAEDARSAALAAGLAGKSAEAVRRCRAEYQALAQAAEEPRRKARMLAGL
AETVRGAGENSYRMSLNTYVLAARLEQVASAASERLVAMSDGRYTVQHTDAKAARGAKSG
LGLEVVDEWTGQRRDTSTLSGGESFMASLSLALGLADVVQHEAGGVDIETLFVDEGFGSL
DEQALEQVMDALEGLRDGGRVVGLVSHVAEMKQRITSQLQVVKGRHGSSVRIAEVVPT
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatccaccgcctggacatcgaagcgttcggtccgtttgccacgccccagcacatc
gacttcgaccagttgagctcccaaggactcttcctgctcaatggggcaaccggtgccggc
aagaccagcatcctcgatgccatctgtttcgccttgtacgggtcagtgcctggcgcccgc
caggagggtaagcggctccgcagcgaccacgcagcgcccggggctgaaccgcgtgtagtc
tgcgaattcacagcacgagggcggcgctttgaggtgagccgatcgcccgcgtgggaacgc
cccagcgcgcgtggccgcaatggatacaccacccagcaggccaagacgctcctccgggaa
cgcgttggaggcagctgggaggaaaagtcatccaggaatgacgaggtaggggccgagctt
tccgacgtccttgggatggaccgggaccagttcacccgtgtggtgatgctcccccaaggg
gactttgcggccttcttgcggtccaaggccagcgaccgcctggaccttctccagaaattg
ttcggcactcaacggttcgaggccgttgaacggcaacttgcccagcaggcggccgcagca
gccaaagaggttggggagaacgcttcggggctccaggtgctgctggacagggttgcgtca
gaacaggcgcaattgggtgtttccggcgccacgggggaggaagcctctgtagagcgagcc
gggcccgcattcacagcaggtgacgcgccccgggctgacaacgaggaccctgaggcttgg
ctcgccactgtggaagaagaagtccaggctgaatggaaacgccgggaggccgccgccagc
gaagcggaatcgcagtccgcccggtatgccgaagagttccaggaagccgaagagaagtca
ctgcggcatgctcgcctcgccgcagccctgcagcggaggatcctggctgaactggctgca
ccccgggcgcttgagaacagggaagcgctggcaaagcaccgtcgagctgccgttctcagt
ggccagctcgacgctgttgattccgcagcacgtaaggtcgattccgccgttgagcgggtg
gcaaaggcgcgcggcaaactagccgctgcaggcgtggatgccgacgatcccaccgcggcc
ctggacgctgcgaaggcgtcgcatgcggtcctccaggcccggttgccggacgagcaacgc
atggaagagatcgcgggccgccttgctgccaagcggactgaagagactacccatcaggct
gctgcggccaaggcaacgtccctgctggatcagttgcgcgaagaagcggccacccttgac
tcacgaatggagccactggaacccctcgctgtccatttggcagaccgcgagcgggacgcc
tcatcagcagccgaactggtaggcatcgtggcccgctactccacggctgcctccgagctg
gacaccctcaccggtaaacacctccaagcacggtccgactcccaggaccttcgtcagcac
tggcttgatgtccgggaactccgtctcgccaacgccgccggagagcttgccatggcgttg
gaaagcggcaagccgtgcgctgtctgcggcagtgaggaccatccgaagcctgctgcagca
gcgcgctcggcactctctttggcccaggacgaggaagaagccaggcagcgttttgaaagc
agcgagcaagccctggcggacttggctgggcacgtttccgctgcggcccaggtcgttgcc
gggttggcggcccagggcggctcgcttgacatggccgaagctgacgccaagcttgtgtcc
gctgaatctgctgcgctggaggcccggaaggcgaccaccctgctggcggagctgcggggc
gagcgtgaggccctcagtcaacggatggcccaggtacaggaagcacactccgcgtctgtg
ggcgccgccgcgcaggcggcctcggctgtcctgcttcttcaggagcaacgtgatgccctg
gaagctgagctggcaggtctaaggggggacttcccgagcctgcgtgaacgtctggaagct
ctgtccagggagcgcactctccttcaggaggccgctgatggggaccaggagcttgagggt
gcgcggcaggtcatggttgaggccacggctgccttggagcgggcgttgcctgaatccgga
tttggttctgctgaggaagcccgtcgcgagttgctttctcccgctgacgtggttggactc
gaacaggacctcgccgatttcgatgccgaaacagcaaagctggatgagctgtttgccagc
gaagacctggtcctggcagccaaagaagccagcattggcgaacttcccctgcctgaatcc
gaacgtgcggaggcacggctccgtgcttccaaggccgcagaggatgcccggtccgcggcc
ctcgccgcagggctcgcgggcaagtccgctgaagccgtacgccgctgccgggcggagtac
caggcccttgcccaggctgctgaggaaccgcgcaggaaggcccgcatgctggccgggctg
gctgagaccgtacgtggagccggggaaaacagctaccggatgagcctgaacacgtacgtc
ctcgccgctcgtttggaacaggtggcctccgccgcttccgagaggctcgttgcaatgagc
gacggccggtacaccgtgcagcacaccgacgccaaggctgcgcgtggcgcaaagtccggc
ctcggattggaagtagttgacgaatggaccggccaacgtcgtgacacttccacgctctca
ggcggtgagtccttcatggcctcgctgtcccttgccttggggctcgcggacgttgtccag
catgaggccggcggagtggacattgaaactctgttcgtcgacgaaggcttcggcagtctc
gacgagcaagcgctcgagcaggtcatggacgccttggagggactgcgcgacggcggccgg
gtcgtcggactggtcagccacgttgcggaaatgaagcagcgcatcaccagccagctccag
gtggtcaaaggacgccacgggtccagtgtgcggattgccgaggtggttcccacgtga
DBGET
integrated database retrieval system
