Paenarthrobacter sp. GOM3: IRJ34_12855
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Entry
IRJ34_12855 CDS
T10366
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pago Paenarthrobacter sp. GOM3
Pathway
pago03030
DNA replication
pago03430
Mismatch repair
pago03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IRJ34_12855
03430 Mismatch repair
IRJ34_12855
03440 Homologous recombination
IRJ34_12855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pago03032
]
IRJ34_12855
03400 DNA repair and recombination proteins [BR:
pago03400
]
IRJ34_12855
Enzymes [BR:
pago01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IRJ34_12855
DNA replication proteins [BR:
pago03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IRJ34_12855
DNA repair and recombination proteins [BR:
pago03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IRJ34_12855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
WOH17245
LinkDB
All DBs
Position
complement(2760518..2761528)
Genome browser
AA seq
336 aa
AA seq
DB search
MALDFTAIDFETANGFRGSPCSVGLSKVRNGVVVEEASWLMRPPENHDHFEFHNTRIHGI
RAEDVTGRPRFGELFPEIGAFIGGDVLAAHNAAFDLGVIRSGLEVSGLPGPAYHYVCTVM
LSRRCYSLVSNSLPYAAEEAGVPLVNHHDAAEDARACAGILVDIARRNNANSIAELYLSL
GLNLPHQPAFDPALGLSKATVSALAAKNGSSLERALEGTLGGPSGWSAWPEEGPNPLPNP
AAEPGHPLFGQTVVFTGDLAITRPEAKSRAADMGARPESRVTARTTVLIVGDGFVAGDLR
AGRLTGKAKRVLELHAKGQQIEVVSEGEFLQMVGGA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtggcattggactttacggcgatcgactttgaaacagccaacggcttcagggggtccccg
tgttcggtgggactcagcaaggtccgtaacggggttgtggtggaggaagcctcgtggctg
atgcgcccgcctgagaaccacgatcatttcgagttccacaacacacggatccacggtatc
cgcgctgaagacgtgacggggcgcccgcggtttggggagctcttccccgaaatcggggct
ttcatcggtggcgacgtacttgccgcccacaacgcggccttcgacctcggtgtcatccgc
tcgggcttggaagtctccggtcttccggggcccgcttaccactacgtgtgcaccgtcatg
ctgtcccgccgatgctattcgctggtgtccaactcgctgccttatgcggccgaggaagcc
ggagttccgttggtgaaccaccacgacgcagctgaggatgcccgcgcgtgcgcaggcatc
ctggtggacatagcccggcgcaacaatgccaacagcatcgctgaactctatctttccctg
gggctgaacctgccccatcaaccggcgttcgatcccgcgttgggcctgtccaaagccacc
gtgtcagcgttggccgcgaagaatggcagttccctggagcgggcgctggaagggaccctg
ggtggtccaagcggttggtcggcatggccggaggaaggccccaacccgctgcccaacccc
gcggccgagcccggacacccgctcttcggacagaccgtggttttcaccggtgatctggcc
atcacacggcccgaagcgaaatcccgggccgcggacatgggagcccgccctgaaagccgg
gtgactgcccgaaccaccgtgctgattgtcggagacggtttcgtggctggagacctgcgg
gcaggacggcttactggcaaggcaaaacgggtccttgagctccatgccaagggacagcag
atcgaggtggtctctgagggcgagttcctgcagatggtgggcggcgcctga
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