Paenarthrobacter sp. GOM3: IRJ34_13090
Help
Entry
IRJ34_13090 CDS
T10366
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pago Paenarthrobacter sp. GOM3
Pathway
pago00300
Lysine biosynthesis
pago00470
D-Amino acid metabolism
pago01100
Metabolic pathways
pago01110
Biosynthesis of secondary metabolites
pago01120
Microbial metabolism in diverse environments
pago01230
Biosynthesis of amino acids
Module
pago_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pago00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IRJ34_13090 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IRJ34_13090 (lysA)
Enzymes [BR:
pago01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IRJ34_13090 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WOH17290
LinkDB
All DBs
Position
complement(2808143..2809615)
Genome browser
AA seq
490 aa
AA seq
DB search
MNTNAAHASPLAPDWLAVPEDLNALQSPMWAAGVEKNDAGEVTIDGLAVSALKEQFGTPL
FVMSESDFRSRARAFKDAFDEAFADICGGVDVYYAGKSFLCTAVATWVAEEGLRLDTCSG
GELAVAARAGIEGPNLGLHGNNKSDAEINRALDMSLGRIVVDSLDELERVAKIASSRGET
AKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAGDSTDEAGLSAAEEAVAAATAYDSIEL
LGLHCHIGSQIFEPDGFALAAEKLLGFLAAMQAKYSITLPELDLGGGYGIAYTPVDTPRP
AAEIAQAMADVVRSTCVQLGITAPRISIEPGRAIVGSSTFTLYEVGTLKTVRVDVPESET
GEGNVTYPRRYVSVDGGMSDNARPVLYDADYSAILASRDSTAAPQLSRVVGKHCESGDIV
VRDVYLPADVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGAARLIVRGETEEDL
LNRDMGVANV
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaaacgctgcacacgcttcaccgctcgctccggattggttggccgtccccgag
gacctcaacgccctgcagtcgcccatgtgggctgccggcgtggagaagaacgacgccggc
gaggtcaccatcgacggccttgctgtcagtgcgctgaaggaacaattcggtacaccactg
ttcgtcatgagcgagtcggatttccgatcccgcgccagggcgttcaaggacgccttcgac
gaagctttcgctgacatctgcgggggagtggacgtctactacgcagggaagtccttcctg
tgcactgcagtggccacctgggtggctgaagagggcctccgcctggacacctgttccggg
ggtgagcttgcagttgccgcccgtgcggggatcgagggtcccaaccttgggctgcacggc
aacaacaaatccgacgcggaaatcaaccgtgccctggacatgtcccttggccggatcgtg
gtggatagcctcgatgaactggaacgggtggcaaagatcgcctccagccggggcgaaaca
gccaaagtcatgctgcggctgaccccgggcgttcacgcccacacccatgagttcattgcc
actgcccacgaggaccagaagttcggcctctccatggcgggggactccaccgacgaagca
gggctctcggcagcagaagaggcagtggctgcggccaccgcctacgacagcatcgagctg
ctgggcctgcactgccacatcggctcacagattttcgagcctgacggctttgccttggct
gcggagaaactcctcggtttccttgctgccatgcaggcgaaatactccatcacgcttccc
gaactggacctcggcggaggttacggcatcgcctacacacctgtggacacgccccggccg
gccgccgagatcgcgcaggccatggccgacgtcgttcgttccacgtgtgtccaactgggc
atcactgcgccacggatctccatcgaaccaggacgcgcaattgtgggaagcagtaccttc
acgctctatgaagttggcacgctcaaaaccgtccgtgtcgacgtcccggagagtgaaaca
ggggaggggaacgttacgtatccgcggcgctatgtgtcggtggacggcgggatgagcgac
aacgcccgtccggtgctgtacgacgcggattattcggcaattttggcttcacgcgactcc
acggccgctccgcagctgtcccgcgtagtgggcaaacattgcgagagcggcgacatagtt
gttagagatgtatatctgcccgcggatgtggcagccggtgatttgctcgcagtaccgggt
accggcgcctactgctgggccctctccagcaactacaactacctggcccggcctggcgtt
gtcgctgtacgcgacggagccgcccggctgattgtccgcggggaaaccgaagaagatctc
ttgaaccgcgacatgggagtggcgaatgtctga
DBGET
integrated database retrieval system