Paenarthrobacter sp. GOM3: IRJ34_13735
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Entry
IRJ34_13735 CDS
T10366
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pago Paenarthrobacter sp. GOM3
Pathway
pago03420
Nucleotide excision repair
pago03430
Mismatch repair
Brite
Enzymes [BR:
pago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IRJ34_13735
DNA repair and recombination proteins [BR:
pago03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IRJ34_13735
MMR (mismatch excision repair)
Other MMR factors
IRJ34_13735
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOH17407
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Position
complement(2959086..2962592)
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AA seq
1168 aa
AA seq
DB search
MTIELLDGSASSTPGAEDVPEPRFTPSQLADILGEKNHPTDEQSAIIASSLTPRLVIAGA
GSGKTATMADRVVWLVANGWVRPEEVLGVTFTRKAAGELASRIRTKLATLQRIAAEDDGS
IGFPEGLMGADDLEPKVSTYHSYASGIVSDYGLRLGIERDVVLLGGAQSWQLASEVVEAY
DGDYEHFTAAKSTLVNAVIQLAGECAEHLQDPAAVREWVLERVHAFEELPYVAGAKKNPT
QAAGELASMLRTRASVADMVVRYQDAKRQRGVLDFGDLVALAARIASDIPLAATTERARY
KVVLLDEFQDTSHAQLVLFSRLFGQGHAVTAVGDPNQSIYGFRGASAGQLFHFVQEFPVK
HLDVAGGTEAYSVAPTSYLTTAWRNGRNILEAANTIASPLNKAAETDGPAGERESATSVL
VPALVPSPAAADGSVVIGRFSTDEDEAAVIARDVRRYQRTVFEEEKDGTPVRPTMAVLCR
RRAQMECLRREFELQGIPYEIVGLGGLLDTPEIVDLVATLRVLADPGRSDALMRLLAGAR
WRIGPADLMAFSDWSRSLARRRSAPASHPDPLDANEEPAAVVVESDITDAASLVEALDFL
PKPGWTSGHGRSLSEAALERLARLASELRFLRSYIGDDLTTLLGEVERAMLLDIEVAAKP
GISIHQARRNLDAFQDAAAGFLQTSQRIDLLAFLSWLEAAASEEGGLDVAPVETNREAVQ
LLTVHASKGLEWDVVFVPGLNAGSFPSNRDSRWSSGAAALPWPLRGDRADLPQWDLDQPD
QKGWLDAEKDFKSEVQHHGEAEERRLAYVAYTRAKFVLWASSAAWNGSRSGMASMSGFLS
ELAPLAGLEGDGAEPGPSRRNGRAVVHPESVAEEALPEESPLTATLEVARFPYDPLEGPS
DPRTGARLRLVPGRRAAMDQAAASVREFIERPTPGVALDELSGVASKWPQEAELLLDRQR
MRTSVQDVHLPSHISASLFVDLGADPAAVLSQLRRPVPREPGISARKGTAFHAWVEEYFG
TTGMLDLDEAPGSDAHIDEAYGLDDMVSAFKQSEWAHRAPAFVEVPVETRIGDVVVRGRI
DAVFRDPDGHWQLIDWKTGRRPSGQQLASRAVQLAVYRLAWARLQGVPLDDVSAAFYYMV
DDSVVRPHDLGTAEELEEIIARALKNSA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgagctcctggatggttctgcctccagcactcctggcgcggaggacgttcct
gagccccggttcacaccatcgcaactggctgacatcctgggtgagaagaaccaccccacg
gacgagcaatcagccatcattgcctcctcccttacaccgcgcctggtgatcgctggagcc
ggttccggcaagaccgccaccatggcggatcgcgtggtgtggctggtggcaaacggctgg
gtgcgcccggaagaagtccttggcgtgactttcacccggaaggccgcaggggagcttgcc
agccgcatccggaccaagctggccacactgcagcggattgccgccgaagacgatggcagc
atcgggtttccggaagggctgatgggtgccgatgacctcgaacccaaggtctccacctac
cactcctacgcaagcggcatcgtctccgactacggcctgaggttgggcattgaacgcgac
gtcgtcctgctgggtggcgcccagtcctggcagctcgccagtgaagtcgtggaggcttac
gacggcgactacgaacacttcaccgcagccaagtcaaccctggtcaatgccgtcatccag
ctggcgggggagtgtgccgaacaccttcaggatccggccgctgtcagggaatgggtcctt
gaacgcgtccacgccttcgaagagcttccgtacgtagcgggtgcgaagaagaaccccacc
caggctgccggtgagctggcgtcgatgctccggacgcgtgccagcgtcgcggacatggtg
gtccggtaccaggacgcaaagcgacagcgtggggtcctcgatttcggtgacctcgtggcg
ctcgccgcccggattgccagcgacatcccccttgctgccaccaccgaacgtgcccgctac
aaggtggtgctgctggacgaattccaagacacctcccatgcccagctcgtcctgttctcc
cgtttgttcggacagggccatgctgtcaccgcggtgggcgaccccaaccaatcgatctac
ggcttccggggtgcttcggcgggccagcttttccattttgtgcaggagtttccggtcaag
caccttgatgtggcaggcggcactgaggcgtactccgtggctccgacgtcgtacttgacc
actgcctggcgcaacggccggaacatactggaggcggccaacaccatagcctcgcccctg
aacaaggccgcggaaacggatgggccggcaggggagagggaatcagccaccagcgtcttg
gtcccggcactggttcccagcccggcggcggctgacgggagcgtcgtgatcgggcgtttc
agcaccgatgaggacgaagccgccgtcatcgcccgcgatgtccggcgctaccagcggacc
gtcttcgaagaggagaaggacggtacgcccgtccggccaacgatggccgtgttgtgccgc
aggcgcgcccagatggagtgccttcgtcgtgagttcgagctgcaaggaatcccgtacgag
atcgtcggtctgggaggcctgctggacacgccggagatcgtggacctggtggccaccctc
cgggtcctggcagatcccggacgttctgatgccctgatgaggttgctggccggcgcacgt
tggcgcattggtccggcggacctgatggctttcagcgattggtcgcgttcgctggcccgt
cgccggtctgcccccgcttcccaccccgatcccctcgatgccaatgaggagcctgccgcg
gtggtggttgaaagcgacatcaccgacgctgcaagtctggtggaggcactggacttcctg
cccaagcccggctggacgtccgggcacggaaggagcttgagcgaggccgccctggaacgc
ctggccaggctcgcctcggaacttcgcttcctcaggagctacattggcgacgacctcacc
acgctcctcggagaagtggaacgggccatgctcctcgacatcgaagtggccgccaaacca
ggtatcagcattcaccaggcgcgccgcaacctggatgcgttccaggacgctgcggccggg
ttcctgcagacgtcgcagcgtatcgacttgttggctttcctgtcctggctggaggcggcg
gcatcagaggaaggcggattggacgtcgccccggtggagaccaacagggaagccgtgcag
ttgctgaccgtccatgcctccaagggtttggaatgggacgttgtctttgttcccgggctc
aacgccggctcgttccccagcaaccgggattcccgatggagcagcggagctgcagcattg
ccgtggccgttgcggggggaccgcgccgaccttccccagtgggaccttgaccagcctgac
caaaagggatggctggacgcagagaaggatttcaagtcagaggtccagcatcacggcgag
gcagaggaacgcaggctggcatatgtggcctacacccgggcgaaattcgtcctctgggcc
tccagcgcagcctggaatggttcacgctcggggatggcctcgatgtcgggtttcctttca
gaactggcaccgctcgccgggttggaaggggacggcgcggagccgggaccttcccgcagg
aatgggcgggcagtcgtccatccggaatccgtagctgaggaagccctgccggaggaaagc
ccgttgaccgcgaccctggaagtagcccggtttccctatgatcctttggaaggcccgtcc
gatcccaggaccggcgcgcgtctcaggctggttccagggcgtcgggctgccatggaccag
gcggctgcttcggttcgcgagttcatagaacgtcccacccccggtgtcgcccttgatgaa
ttgagtggcgtggcctcaaagtggccccaggaggccgaactcctgctggaccgccagcgg
atgcgtacatcagtccaggatgttcacctgcccagccacatctctgcgtcccttttcgtg
gacctcggtgctgacccagcggctgtcctgtcccaactccgcaggcccgtgccccgggag
cctggcatctctgcccgtaagggtacggcgttccatgcatgggtggaggagtacttcggg
acaactggcatgctcgaccttgacgaagcgccgggttccgacgcgcacatcgacgaggcc
tacggcctggatgacatggtgtcggcgttcaaacaatcagagtgggcccatcgtgccccc
gctttcgtggaagttcccgtggaaacccgcattggcgacgtcgtggtccgcggacgcatc
gacgctgtcttccgtgacccggacgggcattggcagctcatcgactggaagaccggccgc
cggccctccggccaacagctggcgtcgcgcgcagttcaactcgccgtgtaccggctcgct
tgggcacggctgcaaggggtgcccctcgacgacgtcagtgccgcgttctactacatggtg
gacgactccgtggtgaggccccatgatctgggcacagccgaagaactggaggagattatt
gcgcgtgcgttgaagaacagcgcctga
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